| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4525 |
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| Symbol | |
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| ID | 3972074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5050548 |
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| End bp | 5052029 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927636 |
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| Product | major facilitator transporter |
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| Protein accession | YP_534366 |
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| Protein GI | 90425996 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.432658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGAG TGAGCAGCGT CGCAGGCGCC GAGCCGGTCG GCACGCCGGT CCCGGCTGAG
GGCGCCGATC GCATCATCGA GACCGATATT CCGGCGCGGC TCGACCGGCT GCGCTGGGGC
ACCTTTCACA CCCGCGTCGT GGTGGCGCTC GGCATCACCT GGATTCTCGA CGGCCTCGAA
GTCACGTTGG CGGGTGCGCT GTCCGGCGCG CTGAAAGAGA GCCCATCGTT GCAGTTTTCC
AATTTCGACG TCGGGCTTGC CAACAGCGCC TATCTCGCCG GCGCGGTGCT GGGCGCGCTC
GGCTTCGGCT GGCTGACCGA CCGTATCGGC CGCAAGAAAC TGTTCTTCAT CACGTTGGCC
TTGTATCTCA CCGCCACCGC CGCCACCGCC TTTTCCTGGA GCGTCGGCAG CTACGCGCTG
TTTCGCTTTC TCACCGGCGC CGGCATCGGC GGCGAATACA CCGCGATCAA TTCGACAATC
CAGGAGCTGG TGCCGGCGCG CTACCGCGGC TTCACCGATC TCGTGATCAA CGGCAGCTTC
TGGGTCGGCG CGGCACTCGG CGCGGTGGCG GCGATCGTGC TGCTCGATCC GGCGGTGATC
GGCCCCGACT ACGGCTGGCG GCTGGCTTAT CTCACCGGAG CGGTGCTCGG CCTGGCGGTG
TTGTTCATGC GGCTGTGGAT CCCGGAGAGC CCGCGCTGGC TGATGATCCA CGGCCAGCCC
GAGCGCGCCA ACGCGATCAT CGCCGACATC GAGCGCACCG CGCAGGCGCC GCCGGTGACG
ACGCTGCTGC CGACCATCCG GCTGCGGATG CGCAGCCATA CCCCGCTGCG CGAGGTCGCC
CATACGCTGC TCACGCTGTA TCGGCAGCGC TCGCTGGTCG GGCTGTCGCT GATGACCGCG
CAGGCGTTCT TCTACAACGC GATCTTCTTC ACCTATGCGC TGGTGCTGAC CGATTTCTTC
GGCATCGCCT CCAATCAGGT CGGCTGGTAC ATTTTGCCGT TCGCCGCCGG CAATTTCCTC
GGCCCGCTGC TGCTCGGGCG GCTGTTCGAT ACGTTGGGCC GCCGGGTGAT GATCCCGCTG
ACTTATGGAA CCTCCGGCGT GCTGCTGGCT TTATCCGGGT ATCTGTTTTC GATCGGCGCG
CTCAGCGCCC AAACCCAGAC CATCGCCTGG ATGGTGATCT TCTTCTTCGC CTCGCCGGCG
GCCAGCGCTG CCTATCTCAC CGTCAGCGAA ACCTTTCCGC TCGAAGTCAG GGCGTTGGCG
ATCGCGCTGT TCTATGCCAT CGGAACTGGG ATCGGCGGCG TCGCCGGTCC GGCGCTGTTT
GGCGCGCTGG TCGATACCGG CTCGCGCAAC AGCGTGTTCG CGGGCTATCT TCTCGGCGCG
GGCCTGATGA TCGCTGCGGC GGTGATCGCG CGTCGCTACG GCATCGCCGC CGAACGAAAA
TCGCTTGAGT CAGTGGCGCG CCCGCTGGCC ACCGTGGAGT AG
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| Protein sequence | MAGVSSVAGA EPVGTPVPAE GADRIIETDI PARLDRLRWG TFHTRVVVAL GITWILDGLE
VTLAGALSGA LKESPSLQFS NFDVGLANSA YLAGAVLGAL GFGWLTDRIG RKKLFFITLA
LYLTATAATA FSWSVGSYAL FRFLTGAGIG GEYTAINSTI QELVPARYRG FTDLVINGSF
WVGAALGAVA AIVLLDPAVI GPDYGWRLAY LTGAVLGLAV LFMRLWIPES PRWLMIHGQP
ERANAIIADI ERTAQAPPVT TLLPTIRLRM RSHTPLREVA HTLLTLYRQR SLVGLSLMTA
QAFFYNAIFF TYALVLTDFF GIASNQVGWY ILPFAAGNFL GPLLLGRLFD TLGRRVMIPL
TYGTSGVLLA LSGYLFSIGA LSAQTQTIAW MVIFFFASPA ASAAYLTVSE TFPLEVRALA
IALFYAIGTG IGGVAGPALF GALVDTGSRN SVFAGYLLGA GLMIAAAVIA RRYGIAAERK
SLESVARPLA TVE
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