| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4518 |
|---|
| Symbol | |
|---|
| ID | 3972296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 5041977 |
|---|
| End bp | 5042246 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637927628 |
|---|
| Product | conjugal transfer TraD |
|---|
| Protein accession | YP_534359 |
|---|
| Protein GI | 90425989 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.527505 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACTT GGCAGGTCGA GCGCCGCAAG CGCACGCGGC ATCTGATCGA ACTCGGCGGC
CTTATCGCCA AGGCCGGGAT TGTGGAGCTG ACCGGCGACG ACCGCGCCAC GATTTACGGC
GCGCTGCTCT GGATGGCAGA CAAGCTGCAA AGCGATCAGG GCGAACACGC GCGCGAGCTA
TGGGCCGCAA AGGGAAAGCA GGCATTCGCT GTGGAACGAG CCACAGACGC GCCCACCATC
TCGCAGGAAA GGCCATGGGA TCGGGCTTGA
|
|---|
| Protein sequence | MRTWQVERRK RTRHLIELGG LIAKAGIVEL TGDDRATIYG ALLWMADKLQ SDQGEHAREL
WAAKGKQAFA VERATDAPTI SQERPWDRA
|
|---|
| |