| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4515 |
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| Symbol | |
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| ID | 3972293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5038768 |
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| End bp | 5040432 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637927626 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_534357 |
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| Protein GI | 90425987 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.328844 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCGGGT TTAACAGCAA GAGAGTGAAG CACGCGCTGG CGGAGGTCGA GGCACTCGAC
CGCTTGCAGG CTGTCATCGA ATTCGACCTC GATGGTACCA TCCTGAACGC CAACGAGAAC
CTCCTGAAGA TGAGCGGCTA CACGCTCGCG GAGATCAAGG GCAAGCATCA CAGCATCTTC
GTCAGCCCGG CCGAGCGCGA GAGCGCCCGC TATCGCGACT TTTGGAAGAG CCTGAACCGC
GGCGAATTCC AGACCACCCA ATACAAGCGC TTCGGCAAAG ACGGCAAGGA AGTCTGGGTC
CACGCCTCCT ATGCGCCGCT GCGCGACGAG ACCGGCAAGG TCGTCAGCTT CATCAAGTTC
GCGACCGACA TCACGGCGTA CAAGCTTAGG ACCATGGAGG ACGCCGGCAA GATTGCCGCG
ATCAACCGTG CCCAGGCTGT GATCGAGTTC GAGATGGACG GCACCGTCAT CACCGCCAAC
GAGAATTTCC TGGGCGTGAT GGGCTATTCG CTCGCCGAGA TTCAAGGCAA GCACCACAGC
ATGTTCGTGA CGGTCGAGGA TCGCGCGAGC GCCGGCTATG CCGAATTCTG GGCGCGGCTC
AACCGCGGTG AGTTCATGGC CGCCGAATAC AAACGGATCG CAAAGGGCGG CGGCGAAATC
TGGATTCTCG CGACCTACAA CCCGATCCTC GACGAGACCG GCAAGCCGCT AAAGGTGGTG
AAGTTCGCAA CGGACGTCAC CGCGCAGAAG ATGAAGGCGG CGGACAGCGA CGGCCAGCTC
GCCGCGATCC AGAAGTCGCA GGCCGTGATC GAGTTCAACA TGGACGGCAC GATCCGTACA
GCGAACCAGA ACTTTTTGAA TGCGATGGGT TATTCGCTCG CGGAGATCAA GGGCCAACAC
CACAGCATGT TCGTCGAGCT ACGCGATAAG AACTCGGCCG CCTACCGCCA ATTCTGGGAA
GCGCTCAATC GCGGCGAATA CCAGGCCGCC GAATACAAAC GGATCGCCAA GGGCGGCCGG
GAGATATGGA TCCAGGCCTC CTACAATCCG ATCTTGGATC TCAACGGAAA GCCCTACAAG
GTGGTGAAGT ACGCCACCGA CATCACCGCG CAAGCGATCG GCCGCAAGAA GGCGGACAAT
GCGCGTGGGC TCATCGAGGC GGTTGCGGCC GGCAGCGAGC AGATGAGCGC ATCGATTCGC
GAGATCTCCG AAACCATGGC GAAGTCGCGC GAGACCTCGA AGGGCGCGAC CGCCCGGGTC
GACGCTGCCG ACGGCCAAGC GCAAAGGCTG AACGCGGCCG CGCAGGCGAT GAGCGGCATC
GTCGAGATGA TCGCCGGCAT TACCAGCCAG ATCAATTTGC TCGCGCTCAA CGCCACGATC
GAATCCGCGC GCGCGGGCGA ATCCGGTCGC GGCTTTGCGG TGGTCGCCTC CGAGGTGAAA
AACCTCGCCG GTCAGGCCAA GCAGGCGACC GACACGATTA CGGCGGAAAT CGAAGCGCTG
AACGCCGTCT CCAGCGGAGT CGCGAGCTCG CTGACCGCGA TCAAGGCCGC GATCGCCGAT
GTCAACGAAT TCATCGCCTC CACCGCCGCA GCGGTCGAGG AACAGAGCGC AGTGACGGCG
GACATGTCGG CCAACATGCA GCGCGCATCG GCGGAACTGG CTTAG
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| Protein sequence | MFGFNSKRVK HALAEVEALD RLQAVIEFDL DGTILNANEN LLKMSGYTLA EIKGKHHSIF
VSPAERESAR YRDFWKSLNR GEFQTTQYKR FGKDGKEVWV HASYAPLRDE TGKVVSFIKF
ATDITAYKLR TMEDAGKIAA INRAQAVIEF EMDGTVITAN ENFLGVMGYS LAEIQGKHHS
MFVTVEDRAS AGYAEFWARL NRGEFMAAEY KRIAKGGGEI WILATYNPIL DETGKPLKVV
KFATDVTAQK MKAADSDGQL AAIQKSQAVI EFNMDGTIRT ANQNFLNAMG YSLAEIKGQH
HSMFVELRDK NSAAYRQFWE ALNRGEYQAA EYKRIAKGGR EIWIQASYNP ILDLNGKPYK
VVKYATDITA QAIGRKKADN ARGLIEAVAA GSEQMSASIR EISETMAKSR ETSKGATARV
DAADGQAQRL NAAAQAMSGI VEMIAGITSQ INLLALNATI ESARAGESGR GFAVVASEVK
NLAGQAKQAT DTITAEIEAL NAVSSGVASS LTAIKAAIAD VNEFIASTAA AVEEQSAVTA
DMSANMQRAS AELA
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