Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4515 |
Symbol | |
ID | 3972293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5038768 |
End bp | 5040432 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637927626 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_534357 |
Protein GI | 90425987 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.328844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGGGT TTAACAGCAA GAGAGTGAAG CACGCGCTGG CGGAGGTCGA GGCACTCGAC CGCTTGCAGG CTGTCATCGA ATTCGACCTC GATGGTACCA TCCTGAACGC CAACGAGAAC CTCCTGAAGA TGAGCGGCTA CACGCTCGCG GAGATCAAGG GCAAGCATCA CAGCATCTTC GTCAGCCCGG CCGAGCGCGA GAGCGCCCGC TATCGCGACT TTTGGAAGAG CCTGAACCGC GGCGAATTCC AGACCACCCA ATACAAGCGC TTCGGCAAAG ACGGCAAGGA AGTCTGGGTC CACGCCTCCT ATGCGCCGCT GCGCGACGAG ACCGGCAAGG TCGTCAGCTT CATCAAGTTC GCGACCGACA TCACGGCGTA CAAGCTTAGG ACCATGGAGG ACGCCGGCAA GATTGCCGCG ATCAACCGTG CCCAGGCTGT GATCGAGTTC GAGATGGACG GCACCGTCAT CACCGCCAAC GAGAATTTCC TGGGCGTGAT GGGCTATTCG CTCGCCGAGA TTCAAGGCAA GCACCACAGC ATGTTCGTGA CGGTCGAGGA TCGCGCGAGC GCCGGCTATG CCGAATTCTG GGCGCGGCTC AACCGCGGTG AGTTCATGGC CGCCGAATAC AAACGGATCG CAAAGGGCGG CGGCGAAATC TGGATTCTCG CGACCTACAA CCCGATCCTC GACGAGACCG GCAAGCCGCT AAAGGTGGTG AAGTTCGCAA CGGACGTCAC CGCGCAGAAG ATGAAGGCGG CGGACAGCGA CGGCCAGCTC GCCGCGATCC AGAAGTCGCA GGCCGTGATC GAGTTCAACA TGGACGGCAC GATCCGTACA GCGAACCAGA ACTTTTTGAA TGCGATGGGT TATTCGCTCG CGGAGATCAA GGGCCAACAC CACAGCATGT TCGTCGAGCT ACGCGATAAG AACTCGGCCG CCTACCGCCA ATTCTGGGAA GCGCTCAATC GCGGCGAATA CCAGGCCGCC GAATACAAAC GGATCGCCAA GGGCGGCCGG GAGATATGGA TCCAGGCCTC CTACAATCCG ATCTTGGATC TCAACGGAAA GCCCTACAAG GTGGTGAAGT ACGCCACCGA CATCACCGCG CAAGCGATCG GCCGCAAGAA GGCGGACAAT GCGCGTGGGC TCATCGAGGC GGTTGCGGCC GGCAGCGAGC AGATGAGCGC ATCGATTCGC GAGATCTCCG AAACCATGGC GAAGTCGCGC GAGACCTCGA AGGGCGCGAC CGCCCGGGTC GACGCTGCCG ACGGCCAAGC GCAAAGGCTG AACGCGGCCG CGCAGGCGAT GAGCGGCATC GTCGAGATGA TCGCCGGCAT TACCAGCCAG ATCAATTTGC TCGCGCTCAA CGCCACGATC GAATCCGCGC GCGCGGGCGA ATCCGGTCGC GGCTTTGCGG TGGTCGCCTC CGAGGTGAAA AACCTCGCCG GTCAGGCCAA GCAGGCGACC GACACGATTA CGGCGGAAAT CGAAGCGCTG AACGCCGTCT CCAGCGGAGT CGCGAGCTCG CTGACCGCGA TCAAGGCCGC GATCGCCGAT GTCAACGAAT TCATCGCCTC CACCGCCGCA GCGGTCGAGG AACAGAGCGC AGTGACGGCG GACATGTCGG CCAACATGCA GCGCGCATCG GCGGAACTGG CTTAG
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Protein sequence | MFGFNSKRVK HALAEVEALD RLQAVIEFDL DGTILNANEN LLKMSGYTLA EIKGKHHSIF VSPAERESAR YRDFWKSLNR GEFQTTQYKR FGKDGKEVWV HASYAPLRDE TGKVVSFIKF ATDITAYKLR TMEDAGKIAA INRAQAVIEF EMDGTVITAN ENFLGVMGYS LAEIQGKHHS MFVTVEDRAS AGYAEFWARL NRGEFMAAEY KRIAKGGGEI WILATYNPIL DETGKPLKVV KFATDVTAQK MKAADSDGQL AAIQKSQAVI EFNMDGTIRT ANQNFLNAMG YSLAEIKGQH HSMFVELRDK NSAAYRQFWE ALNRGEYQAA EYKRIAKGGR EIWIQASYNP ILDLNGKPYK VVKYATDITA QAIGRKKADN ARGLIEAVAA GSEQMSASIR EISETMAKSR ETSKGATARV DAADGQAQRL NAAAQAMSGI VEMIAGITSQ INLLALNATI ESARAGESGR GFAVVASEVK NLAGQAKQAT DTITAEIEAL NAVSSGVASS LTAIKAAIAD VNEFIASTAA AVEEQSAVTA DMSANMQRAS AELA
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