| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4513 |
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| Symbol | |
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| ID | 3972291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5031739 |
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| End bp | 5033427 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637927624 |
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| Product | ABC transporter related |
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| Protein accession | YP_534355 |
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| Protein GI | 90425985 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0442497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGCG CCCACACCAA GGAAAGGAGA GTCATCGGAA TTTATTCGAC GCTCATCGCA
ACGACGTTGG CGCTGAACGT CCTCGGACTA TGCGTGCCGT TGACGGCGCA GATCATCTTC
AACCGGATCT TGCCGGCGCC GAACACGACC ACCCTGCCGG TGATCGTGTT CGTGGCGCTC
GCGGTCACGT TGCTCGAGGC CTCGCTACGA TTTGCCCGCA ATATCCTGTC TATCGAAGAG
ACGCTCAAGT ATAATCAAAC GCTTATCACG CCGGTGTTCG AACAGCTCGT CCGTGGCGGA
GCCGCCGGAT CAGCCAAGGC CGGGGCGGCG CAGGCGATCG TCTATTTCGG TCGGGTCGGC
CAGGTCGCCG AGGATCTCGG CGGCAAGACC GTCATCGCGC TTGCTGAACT TTCGTTCGTT
CCCGTGGTCC TTGGGCTCAT CTTCTTTATA TCGCCGCTCT CCGGGGTGGC GGTCACGGTG
AGCGTCGCCA TTGGACTTGC CATGACCATG GCAGACGGAT GGAAGATGAA CCGGCTGGCG
CGGATCGTTT CGCGAAAGAC CGAGCGCCGT TACAGTTTTC TTCTCAGCGT GCTGGGTGCG
ATCCACTCCA TCAAGGCGCT CGGCGTCGAG GGACGGGTGG CGCGCCAATA CGAGGTGTTC
CAGGCCGACC TCGCGCGATG CAACTACAGA ATGGCGATAG CCATGGGACG CCTGATGAAC
GAGGTGGCGG TCTCCAATCA ATGGCTCACC ATCGTCGCCC TGCTGTGCGG CGCCTATGGC
GTCGCTGCCG GGTCGATGTC GATTGGCGCG GTTGCGGCGG TGATTTTGCT GTCGGGCCGC
CTGATGGCGC CCCTGCAGCG GGCAGTCTTC TTGTACATTC AAGCCAAGGA TCTATGCGAG
AGCCGCGACG TCGTCGCCGA ACTGCTGGGC AGGGAGGCGG GACGATCTGT CGCCGAGGGG
CCGGAGCTGT CTCGCGACGG CAAACTGGAC GCGGTGGGAC TGTCGTTCCA GATCGAGAGC
CGGCTGTCGA CCGAGCGCTA CACGGGTCTG GACCTGCAGT TGCGGAAAGG CGATTTCGTC
GCCATTGCCG GCTCTTCGGA AAAGGCGTTG ACCCACCTGA TGCGCATCCT CGCCGGCGTC
GAGAAACCCG CCTCGGGTCA TGTGGCGTTG GAGGGAATAC CGGCTGAACA AATCTCCTGC
CGCGCTCTCA ATGCGGGCGT CGCATTGGTG ACGTCGACCG CGATCATGTT CAAGGGCACG
ATCCGGGACA ACATCACGCG CTTCGGCGAG GTCACGATCG ATCAGGCGCT TGCCGTCGCT
GCGATGCTTG GCGTCGAAGC CCAGATCAAT CAACTCCCTC AAGGGGTCGA GACCGCGGTC
TCCGGCGACG TCGTGGAATC CATCTCGGCT TCGCTCTGCC AGCAGATCGC CATCGTCCGA
GCTCTGGCTC ATCGCCCGCG GGTCATTCTT CTCGACAACG CCGACCGCGG GCTCGACCAG
CTTGCTTACG CAAATCTCCA TCGATTTCTT GCGCAGGTGC GGGGCAGGGC CACGGTGGTC
ATCGTGTCCG AAGATCGCAA TCTCACCGGC GGCGCCTCGC GTCACTACGT GCTGCGGCCG
GACGGTCTGC AATTGGATCG GTCACAGGCC TCCGAAGAGC TCACGACCTA CCGCGGACTG
AAGCTATGA
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| Protein sequence | MISAHTKERR VIGIYSTLIA TTLALNVLGL CVPLTAQIIF NRILPAPNTT TLPVIVFVAL
AVTLLEASLR FARNILSIEE TLKYNQTLIT PVFEQLVRGG AAGSAKAGAA QAIVYFGRVG
QVAEDLGGKT VIALAELSFV PVVLGLIFFI SPLSGVAVTV SVAIGLAMTM ADGWKMNRLA
RIVSRKTERR YSFLLSVLGA IHSIKALGVE GRVARQYEVF QADLARCNYR MAIAMGRLMN
EVAVSNQWLT IVALLCGAYG VAAGSMSIGA VAAVILLSGR LMAPLQRAVF LYIQAKDLCE
SRDVVAELLG REAGRSVAEG PELSRDGKLD AVGLSFQIES RLSTERYTGL DLQLRKGDFV
AIAGSSEKAL THLMRILAGV EKPASGHVAL EGIPAEQISC RALNAGVALV TSTAIMFKGT
IRDNITRFGE VTIDQALAVA AMLGVEAQIN QLPQGVETAV SGDVVESISA SLCQQIAIVR
ALAHRPRVIL LDNADRGLDQ LAYANLHRFL AQVRGRATVV IVSEDRNLTG GASRHYVLRP
DGLQLDRSQA SEELTTYRGL KL
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