| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4489 |
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| Symbol | |
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| ID | 3972404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4997995 |
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| End bp | 5001195 |
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| Gene Length | 3201 bp |
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| Protein Length | 1066 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637927600 |
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| Product | hypothetical protein |
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| Protein accession | YP_534331 |
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| Protein GI | 90425961 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3513] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01865] CRISPR-associated protein, Csn1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.10812 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC GTGTTGTCCG GCGTATTCTC GGAATTGACC TCGGTATAGC ATCGTGCGGA
TGGGGGGTCG TCGACATAAG CGGGGCCGGG GGAGGTATCA TCGCTACCGG CGTCCGCTGT
TTCGACGCCC CTCTGATCGA CAAGACCGGC GAGCCAAAGA GCGCAACGCG CCGCACCGCG
CGTGGGCAGC GGCGGATCGT TCGCCGCCGC CGGCAGCGCA TGAATGGCGT CCGCCGCTTG
CTTTGCGAGT TTGGTCTGCT TCCCGATCCG CGACCGGACG CTCTCAATCA GGCGATGCGC
CGAATTTCGA CAGCTTCGGC AGCAGCGCAA GTCACGCCGT GGACGCTTCG CGCCGCCGCA
CATCAGCGTC TTTTGAGCAA CGAAGAACTC GCGGTCGTTC TTGGTCATAT CGCTCGGCAT
CGCGGCTTTC GGTCGAACGC CAAGAACGAG GCCGGCGCGA ATGCCGCGGA CGAAACCTCC
AAGATGAAAA AGGCGATGGA GGCCACGCGC GAGGGGCTCG CAAAGTATCA TGCTTTCGGC
GACATGATCG CCAACGATCC AAAGTTCGCG AACCGCAAGC GCAATCGCGA CAAGGACTAC
TCGCACACCG CGAAACGCTC CGATCTCGAG GACGAGGTTC GCGCAATCCT TCGCGCTCAG
CTTCGATTTG GCAGCGCGGC CGCTACCGAG ACGCTGGCGC AAACATTTGC GGACGTCGCA
TTCTTTCAGC GTCCGCTGCA GGACAGCGAA GACAGGGTGG GCGATTGCCC GTTTGAACCG
GGACAGAAGC GCGCCGCGCG GCGCGCACCT TCGTTCGAGC TGTTCCGTTT TCTCTCCCGA
CTGGCGAATC TCAAATTGGC CGTGGGCCGA TCGCCGGAGC GGCGACTGAC CGCGGAGGAA
ATCGCGTTGG CCGCCAAGGG CTTCGGCGAA ACCAAGAAGA CCATCACGTT CAAATCGCTG
CGCGAGGCGC TCGACCTCGA TCCGAACGCG CGGTTTTCCG GCATCGGCAA GGACAAGGAA
GCATCGCTCG ACGTCGTCGC GCGGACCGGC GGTGCAGCCT ATGGAACGAA GACGTTGAAG
GATGCGCTGG GTGATGCGCC GTGGCGATCG CTGTCGCGAA CGCCAGAAAC ACTCGATCGT
ATCGCCGAAA TCCTGTCGTT CCGCGAGGAC ATCACATCGA TCCGCAATGG GCTTGAAGAC
CTCGGTCTCG ATAGCCTCGT CGTCGAGGCC CTGATGCAGG CGGCGGCCAA TGGCGATTTC
AAGGAGTTCA CCCGGGCCGG GCACATCTCG GCGCGCGCGG CACGCAATAT CATCCCCGGA
CTTCGCGAAG GGTTGGTCTA TTCGGAGGCC TGCGCGCGCG TTGGCTACGA TCATGCCGCG
CGGTTGTCGG TCCCGCTCGA TCAGGTTGGC AGCCCGGTGA CTCGGAAGGC GCTGAGCGAG
GCTCTTAAGC AAGTGAGAGC GGTGGCGCGC GAATACGGAC CGATCGACTA CTTTCATATT
GAACTCGCGC GCTCGGTCGG AAAAAGCGCC GAGGAGCGCA AGCAGCTCAC GGATGGCATC
GAAGCGAGAA ACGTCGAGAA GGCGAAGCGG CGCAAGCAAG CTGAGGAACA CCTCGGCCGC
GCCCCCAGCG ACGACGAGCT CTTGCGATAC GAACTCGCCA AGGAACAGAA CTTCAAGTGC
ATCTATTCCG GCGATGCGAT CGATCCCGCA GGGGTCGCGG CCAACGATAC CCGCTATCAG
GTCGACCACA TCCTGCCGTG GAGCCGGTTC GGCGACGATT CGTATCTGAA CAAGACGCTC
TGCACCGCGA GGTCCAATCA GAACAAGCGC GGGCGCACGC CGTTCGAGTG GTTCGAGGCC
GACAAAACCG ACGTCGAATG GATGGAGTAC GTTGCGCGCG TCGAAAACCT CCAGGAGGTC
AAGGGGCGCA AGAAGCGAAA CTACAGCATC AAGGATGCGG CGGCGATCGA GGACAAATTC
AAGGCCCGCA ACCTCACCGA TACGCAATGG GCCACTCGGC TGCTCGCCGA CGAACTCTCG
CGAATGTTCC CGCCGCGCGA GTGCGAGCGG GCGATTTGCG GTCGGGCGGA CGGCGGCAAC
GACGGATTGA CGATCGTGGA GGAGCGGCGG GTGTTCACCC GACCGGGGGC CATCACCTCC
AAACTGCGGC GGGCCTGGGG CCTGGAGGGC CTGAAGAAGC AGGATGGCAA GCGGGTCGAG
GACGACCGGC ATCACGCCGT CGATGCGCTG GTGCTGGCCG CCACCACCGA GAGCCTGCTG
CAGCGCCTGA CGGTCGAAGT CCAAAGGCGC GAGCGCGAGG GCCGCCCGGA CGACATCTTT
CATTGCGCCG AGCCCTGGCG GGGCTTCCGC GCCGATGTTC GACGCACGGT CTATGGGTCG
GAGACCATGC CCGGGATTTT CGTCTCGCGC GCCGAGCGTC GGCGCGCGCG CGGCAAGGCG
CACGACGCCA CCATCAAACA GATTCGCGAA ATCGAAGGCG AGAGGCTGGT GTTCGAGCGT
AAGCCGGTCG AAAAACTGAC GGACAAGGAC CTGGAGAAGA TTCCGATTCC GAAGCCGTAC
GGGCAGGTGA GCGATCCCAA GCGGTTGCGG GATGAACTGG TGGAAAGTCT GCGCGCGTGG
ATCGCGGCCG GCAAGCCGAA AGACAGGCCG CCGCTGTCTC CGAAGGGCGA TGTCATTCGC
AAGGTTCGGA TACAGACCAA CGACAAAGTA TCAGTCGAGA TCAATGGCGG CACCGTCGAT
CGCGGCGACA TGGCGCGCGT GGATGTTTTC AGGAAGAAAA ACAAGAAAGC TGTTTGGGAA
TATTATGTTG TGCCGATCTA TCCGCATCAG ATCGTTGCAC TGAACGATCC GCCGGACCGC
GCCGTGATCG CTTATGCGGA GGACAAGGAT TGGAAAGAGA TCGACAGCAG TTATGAGTTT
CTTTGGTCGC TGTTCGGGTT GTCCTATGTC GAAATATCGA AAGCGAACGG GGAGTGCATC
GACGGTTACT TTCGTGGTCT TCATCGCGGC ACGGGAGCAG CAAGCGTCTG CAAGCATATC
TCGCTCGGCA AAGATGCAAC GGTCAGCGGA ATCGGACTGA AAACCCTTGC ATCGTTCAAA
AAATTCACCA TCGACCGGCT CGGACGAAAA TTTGAAATTC CGCGCGAGGT GCGTACATGG
CGTGGCGAGG CCTGCACCTG A
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| Protein sequence | MSERVVRRIL GIDLGIASCG WGVVDISGAG GGIIATGVRC FDAPLIDKTG EPKSATRRTA
RGQRRIVRRR RQRMNGVRRL LCEFGLLPDP RPDALNQAMR RISTASAAAQ VTPWTLRAAA
HQRLLSNEEL AVVLGHIARH RGFRSNAKNE AGANAADETS KMKKAMEATR EGLAKYHAFG
DMIANDPKFA NRKRNRDKDY SHTAKRSDLE DEVRAILRAQ LRFGSAAATE TLAQTFADVA
FFQRPLQDSE DRVGDCPFEP GQKRAARRAP SFELFRFLSR LANLKLAVGR SPERRLTAEE
IALAAKGFGE TKKTITFKSL REALDLDPNA RFSGIGKDKE ASLDVVARTG GAAYGTKTLK
DALGDAPWRS LSRTPETLDR IAEILSFRED ITSIRNGLED LGLDSLVVEA LMQAAANGDF
KEFTRAGHIS ARAARNIIPG LREGLVYSEA CARVGYDHAA RLSVPLDQVG SPVTRKALSE
ALKQVRAVAR EYGPIDYFHI ELARSVGKSA EERKQLTDGI EARNVEKAKR RKQAEEHLGR
APSDDELLRY ELAKEQNFKC IYSGDAIDPA GVAANDTRYQ VDHILPWSRF GDDSYLNKTL
CTARSNQNKR GRTPFEWFEA DKTDVEWMEY VARVENLQEV KGRKKRNYSI KDAAAIEDKF
KARNLTDTQW ATRLLADELS RMFPPRECER AICGRADGGN DGLTIVEERR VFTRPGAITS
KLRRAWGLEG LKKQDGKRVE DDRHHAVDAL VLAATTESLL QRLTVEVQRR EREGRPDDIF
HCAEPWRGFR ADVRRTVYGS ETMPGIFVSR AERRRARGKA HDATIKQIRE IEGERLVFER
KPVEKLTDKD LEKIPIPKPY GQVSDPKRLR DELVESLRAW IAAGKPKDRP PLSPKGDVIR
KVRIQTNDKV SVEINGGTVD RGDMARVDVF RKKNKKAVWE YYVVPIYPHQ IVALNDPPDR
AVIAYAEDKD WKEIDSSYEF LWSLFGLSYV EISKANGECI DGYFRGLHRG TGAASVCKHI
SLGKDATVSG IGLKTLASFK KFTIDRLGRK FEIPREVRTW RGEACT
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