Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4478 |
Symbol | |
ID | 3972490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4980943 |
End bp | 4982607 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927589 |
Product | radical SAM family protein |
Protein accession | YP_534320 |
Protein GI | 90425950 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.140837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.22726 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGGGA GCGTCACTGC CGGTTTCGGC AAGGCGGAGC CGCGGCCGCA GGTCGGGGCC GCACAGCCGC TGAAAATCCT GTTCCTGCAT CCGAAGACGC TGGTGGATTC CTGGCCGGTC CCGATCGACA CGTTGGGCGA AATCGTCAAG TTTCCCAGCG CGGTCTATCC GGTGCTCGCC GCCACCATCA AGGATCTCGC GGTCGAGACA AAATTCCTCG ACGGCTATGT GGCGCGGATC TCGCTGCCGG AGTATCGCGC GCGGCTGCGC TGGGCCGACG TGATCGCGAT TTCCTGCATG TCGCCGCTGA AGGCGCTCGA TACCGAACTC ACCATCAAGC TGGCGCGCGA GGTCAATCCC GCGGTGAAAA TCGTGGTCGG CGGCAATCAC GCCACCGCCT GGCCGGACCG TTGGATCGAC GCCGGTGTCG ATTTCGTGGT GACCGGCGAA GGCGAAGCCG CGTTCCGGGC GCTGATCGAG GCGCTGATCG TCGGGGCTGC TGCGTTCGAC GCCGTCCCCA ACCTGTGCTG GCGCGACGGC GACGTGTGCC GGCGCTCGCC GCTGAAGGCC GAGCCGACCG ACCTCGAAGC CGCGCCGATG CCGGACTGGA GCGGTTTTGA CCTGCGGCCT TATGGCCTGG GCATGAGCAA TGGGTTCGGC GCCGCGGTGG AGATTTCCCG CGGCTGCCCG CATCGCTGCG ATTTCTGCAA CATCAACACC TTCTGGAACT ACAAGCAGCG CTACAAGTCG GTCGACAAGG TGATCGCCGA ACTGCAGGCG CTGAAAGCGG CCGGCGTCGG CGAGTTCATC TTCACCGACG ACAATTTCGG CGGCGACGAG CGCAAGACCG TGGCGCTGCT CAAGGAGATG ATCGCCCACC GGCTCGATTT GCGGTTCGGC TGTTTCCTGC GCGGCGACAC CGTGCATCGC AACCCGGATT TCGCCCGCCT CGCGCACCAG GCCGGGATGC GGTTCTGCAT GATGGGAATC GAAACCCTCG ATGCCGAATG GCTGAAGAGC CATCGCAAGG GCGTGCGCGC CCATGATGCG ATCGCCATGT ACAACAAGAT CTACCGGACG CTGCGGGCGC AGGGCATCTT CGTGGTCGGG CTGTTCATCA TCCCGGCACA ACGCGGCAAG GCGCGCTACG TCAAGCCGAC CGGGATCGTC TGCGACTATC AGTTCACCGC CGACCTGGTG GCGCTGCGCG GCAGCGCCCT GTTCGCGCAG CACGCCGAGG CCGACACCGT CTCCAAGGAC ATGTTCTACC ACGACTGGAA CCTGTCGAGC ATCCTGGTCG ACGACCGCGC CGAGCAGCGC AGCGGCAAGT CGTTCTTCCA CACCGTGCGC GAGAACCTGT CGTTTCATGC GTTGCGCCAA GCCTTTGCCG GCTCGCCGGT GGCGCGGCGG TTTCGCTGGC GGCCGCTCTG GATTCTGCTC GAGCGCGCCA TCTGCACCAC ACGCGCCGAC GTCAAACGTT ACCGGGTGGC GCGTTCGAAA GCTTTGACCA TGCAGCAGAA GCAGGACTAC GCTGTCGGCA GCGTGCTCGA TCCGGCGCAC ATCGCCCGCC TGGCGCGCCG ACGAGCGGTG TTGACACCGC TCGGACTGCG CACCAGCCTG TGGACCCGCG CGCATCATAG CCACAGCATC GCGGCCAGAG ACTAA
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Protein sequence | MGGSVTAGFG KAEPRPQVGA AQPLKILFLH PKTLVDSWPV PIDTLGEIVK FPSAVYPVLA ATIKDLAVET KFLDGYVARI SLPEYRARLR WADVIAISCM SPLKALDTEL TIKLAREVNP AVKIVVGGNH ATAWPDRWID AGVDFVVTGE GEAAFRALIE ALIVGAAAFD AVPNLCWRDG DVCRRSPLKA EPTDLEAAPM PDWSGFDLRP YGLGMSNGFG AAVEISRGCP HRCDFCNINT FWNYKQRYKS VDKVIAELQA LKAAGVGEFI FTDDNFGGDE RKTVALLKEM IAHRLDLRFG CFLRGDTVHR NPDFARLAHQ AGMRFCMMGI ETLDAEWLKS HRKGVRAHDA IAMYNKIYRT LRAQGIFVVG LFIIPAQRGK ARYVKPTGIV CDYQFTADLV ALRGSALFAQ HAEADTVSKD MFYHDWNLSS ILVDDRAEQR SGKSFFHTVR ENLSFHALRQ AFAGSPVARR FRWRPLWILL ERAICTTRAD VKRYRVARSK ALTMQQKQDY AVGSVLDPAH IARLARRRAV LTPLGLRTSL WTRAHHSHSI AARD
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