| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4476 |
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| Symbol | |
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| ID | 3972488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4978699 |
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| End bp | 4979619 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927587 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_534318 |
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| Protein GI | 90425948 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.487588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGAAGCG TCAGCGGGTC TTCGACGTCA CAGTTGCACC ATCCCGGGTC TGCGGAGTTC
GGCCACCCGG GATCTGCGGA GCTTCAGCAC CCCGGTGCGA CCGAGCTGCG CCACCCCGGC
GCGCCGCCGG CCGCAGGGAT CGGGGCTTGC CCGTTCCATA ACGATCAGCG CGACAGTCGC
AGCGGCAAGC AGAAGACCCT GGTGCTGACC GGCGCCTCGC GCGGCATCGG CCACGCCACC
GGCAAATTGT TTTCGGAGGC CGGCTGGCGG ATCGTTACCT GTTCGCGGCA GCCCTTCAAC
GACGAGCGCT GTCCGTGGGC GACCGGCGTC GAGGATCACG TCGAGATCGA GCTCGGCGAT
TACCGCGCCT TGCCGCGGGC GATCGCCGCG CTGAAGGAGC GGCTCGGCGG CGCGCCGCTG
CACGCGCTGA TCAACAACGC CGCGATTTCG CCGAAAGGTC TGGAAGGCGA GCGGCTGACC
TCGCTGAACA CCCCGGTCGA GACCTGGATG GGCGTGTTCC ACGTCAATCT GCTGGCGCCG
ATCCTGTTGG CGCAGGGGCT GTTCGACGAG CTACGCGCCG GTTCCGGCTC GATCGTCAAC
GTCACTTCGA TCGTCGGCTC CCGGGTGCAC CCGTTTGCCG GCACCGCTTA TGCGACGTCG
AAAGCCGCTT TGGCCTGTCT GACCCGGGAG ATGGCCCACG ACTACGCGCC TTATGGTATC
CGGGTGAACG CGATCGCGCC GGGCGAGATC AAGACCGATA TCCTGTCGCC GGAAACCGAG
GCGCGGCTGG CGCCGACCAT CCCGATGCGG CGGATTGGTA CTCCCGACGA AGTCGCCAAG
GTGATGTTCT TCCTGTGCTC GGATGCTGCG AGCTATGTCA CCGGCGAGGA GATCCACATC
AATGGCGGGC AGCACGTGTG A
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| Protein sequence | MRSVSGSSTS QLHHPGSAEF GHPGSAELQH PGATELRHPG APPAAGIGAC PFHNDQRDSR
SGKQKTLVLT GASRGIGHAT GKLFSEAGWR IVTCSRQPFN DERCPWATGV EDHVEIELGD
YRALPRAIAA LKERLGGAPL HALINNAAIS PKGLEGERLT SLNTPVETWM GVFHVNLLAP
ILLAQGLFDE LRAGSGSIVN VTSIVGSRVH PFAGTAYATS KAALACLTRE MAHDYAPYGI
RVNAIAPGEI KTDILSPETE ARLAPTIPMR RIGTPDEVAK VMFFLCSDAA SYVTGEEIHI
NGGQHV
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