Gene RPC_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4447 
Symbol 
ID3973073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4953792 
End bp4954901 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content67% 
IMG OID637927558 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_534289 
Protein GI90425919 
COG category[C] Energy production and conversion 
COG ID[COG2025] Electron transfer flavoprotein, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGC CGACCAAAAC CCCGACCCCT GCACCCGCCG GCCGCGCGGC TGCGAAGAAG 
GAGCTGTCCG AGCACTTCAA GCAGTACAAG CACGTCTGGG TGTTCATCGA GCAAGAGCGC
GGTCACGTTC ATCCGGTCTC CTGGGAGCTG ATGGGCTCCG GCCGCAAGCT CGCCGACAAG
CTCGGCGTCG ATCTCGCCGC GGTGCTGATC GGCGCGCCCG GCGAGGCCTT GAACGCCGCG
GTCGCCGAAT CGTTCTGCTA CGGCGCTGAT CTCGCTTATG TCTGCGCCGA CCCGGTGCTG
CAGGATTATC GCAACGAGCC CTACAGCAAG GCTTTGACCG ACATGGTCAA CACCTACAAG
CCGGAAGTGC TGCTGCTCGG CGCCTCGACG CTCGGCCGCG ACCTGGCCGG CGCGGTGGCG
ACCACGCTGT TGACCGGCCT CACCGCCGAC TGCACCGAGC TCGAAGTCGA CACCGACGGC
TCGCTGGCGG CGACCCGGCC GACCTTCGGC GGCTCGCTGT TGTGCACCAT CTACACGCTG
AACTTCCGGC CGCAGATGGC GACCGTGCGT CCGCGCGTGA TGCCGATGCC GGATCGCGTC
GAAAAGCCGA TCGCCCGCGT CATCGAGCAC ACCCTCGGCA TGGTCGAGGC CGACATCGTC
ACCAAGATCC TGGCCTTCGT GCCGGACCGC GACAAGGCGA CCTCCAATCT CGCATTCGCC
GACGTCGTCG TCTCCGGCGG CCTCGGCCTC GGCTCGCTGG AAAACTTCCA GCTGGTGAAG
CAACTCGCCA GCGTGCTCGG CGCCGAATAT GGCTGCTCGC GGCCGCTGGT GCAGAAGGGC
TGGGTCGCCG CCGATCGCCA GATCGGCCAG ACCGGCAAGA CCATCCGGCC GAAGCTGTAC
ATCGCCGCCG GCATCTCCGG CGCGATCCAG CATCGCGTTG GCGTCGACGG CGCCGATCTG
ATCGTGGCGA TCAACACCGA CAAGAACGCG CCGATCTTCG ACTTCGCCCA TCTCGCCCTT
GTCACCGACG CCATCCGGCT GTTGCCGGCG CTGACGGAAG CCTTCCGCAA GCGGCTGTCG
CCGCACACCC GCGACCGGAT CGCAAGCTAA
 
Protein sequence
MAQPTKTPTP APAGRAAAKK ELSEHFKQYK HVWVFIEQER GHVHPVSWEL MGSGRKLADK 
LGVDLAAVLI GAPGEALNAA VAESFCYGAD LAYVCADPVL QDYRNEPYSK ALTDMVNTYK
PEVLLLGAST LGRDLAGAVA TTLLTGLTAD CTELEVDTDG SLAATRPTFG GSLLCTIYTL
NFRPQMATVR PRVMPMPDRV EKPIARVIEH TLGMVEADIV TKILAFVPDR DKATSNLAFA
DVVVSGGLGL GSLENFQLVK QLASVLGAEY GCSRPLVQKG WVAADRQIGQ TGKTIRPKLY
IAAGISGAIQ HRVGVDGADL IVAINTDKNA PIFDFAHLAL VTDAIRLLPA LTEAFRKRLS
PHTRDRIAS