Gene RPC_4446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4446 
Symbol 
ID3970389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4952473 
End bp4953780 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content63% 
IMG OID637927557 
Productelectron-transferring-flavoprotein dehydrogenase 
Protein accessionYP_534288 
Protein GI90425918 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACG AACGTTTCGA CGCGATCGTT GTCGGTGCCG GCATGGCCGG CAACGCCGCC 
GCGCTCACCA TGGCCAAGCG TGGCTTGAAA GTGCTGCAGA TCGAGCGCGG CGAATACCCC
GGCTCGAAGA ACGTGCAGGG CGCCATCCTG TACGCCGACA TGCTGGAAAA GCTGGTGCCG
AACTTCCGCG AGGACGCACC GCTGGAGCGC CACCTCGTCG AGCAGCGGTT CTGGATCATG
GACGAGCGCG CCCACACCGG GCTGCATTAT CGCTCCGACG ATTTCAACGA AGAGAAGCCG
AACCGCTACA CCATCATCCG GGCGCAGTTC GACCGCTGGT TCTCCTCCAA GGTGCGCGAA
GCCGGCGCCA TCGTGCTGTG CGAAACCACC GTCAAGGAAC TCGTGAAGGA CGCCTATGGC
AAGGTGATCG GGGTGTTGAC CGATCGCGAA GGCGGCCAGG TCCATGCCGA CGTGGTGGTG
CTGGCCGAGG GCGTCAACGG CCTGCTCGGC ACCCGCGCCG AATTGCGCGA TCGTCCGACC
CCGCAGAACG TGGCGCTGGC GGTCAAGGAA ATGCACTTCC TGCCGCGCGA GACCATCGAA
GCGCGGTTCA ACCTCAAGGG CGACGAAGGC GTGGTGATCG AGGCCGCCGG CACCATCTCG
CGCGGCATGA CCGGCATGGG CTTCATCTAT GCCAACAAGG AATCGGTGTC GCTCGGCATC
GGCTGTCTGG TGGCGGATTT CCAGAAGACC GGGGAGACGC CGTACGATCT GCTCGACCGC
TTCAAGAAGC ACCCGTCGGT GGCGCCGCTG ATCGAAGGCT CGGAAGTCAA GGAATATGCC
GGCCATCTGA TTCCGGAAGG CGGCTACAAC GCCATCCCGA AACTGTTCGG CGACGGCTGG
GTGGTGGTCG GCGACGCCGC CCAACTCAAC AACGCGATGC ACCGCGAGGG CTCGAATCTC
GCGATGACCT CGGGGCGTTT GGCGGGCGAG GCGATCTTCC AGATCAAGTC GCGTAAGGAT
CCGATGACCG CGGCCAACCT CGCGCTCTAC AAGAAGATGA TCGACGACTC CTTCGTGATC
AAGGATCTGA AGAAGTACAA GGATATGCCG GGTCTGTTGC ACATCCAGTC GCAGAACTTC
TTCCTGACCT ATCCGCAACT GGTGTCGAAG GCGCTGCAGA ACTTCGTCCG CGTCGACGGC
ACGCCGAAGG CGGAGAAGGA AAAGCTGACG CTGAAGTCGT TCGTGGCGGC GCGGTCCTGG
ACCGGGCTGT TCGGCGATGC CATCCGCTTC GCCCGGGCGT GGCGCTGA
 
Protein sequence
MIDERFDAIV VGAGMAGNAA ALTMAKRGLK VLQIERGEYP GSKNVQGAIL YADMLEKLVP 
NFREDAPLER HLVEQRFWIM DERAHTGLHY RSDDFNEEKP NRYTIIRAQF DRWFSSKVRE
AGAIVLCETT VKELVKDAYG KVIGVLTDRE GGQVHADVVV LAEGVNGLLG TRAELRDRPT
PQNVALAVKE MHFLPRETIE ARFNLKGDEG VVIEAAGTIS RGMTGMGFIY ANKESVSLGI
GCLVADFQKT GETPYDLLDR FKKHPSVAPL IEGSEVKEYA GHLIPEGGYN AIPKLFGDGW
VVVGDAAQLN NAMHREGSNL AMTSGRLAGE AIFQIKSRKD PMTAANLALY KKMIDDSFVI
KDLKKYKDMP GLLHIQSQNF FLTYPQLVSK ALQNFVRVDG TPKAEKEKLT LKSFVAARSW
TGLFGDAIRF ARAWR