Gene RPC_4427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4427 
Symbol 
ID3970407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4934618 
End bp4935868 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content70% 
IMG OID637927538 
Producthypothetical protein 
Protein accessionYP_534269 
Protein GI90425899 
COG category[S] Function unknown 
COG ID[COG3395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATG GCTGGTTGAT CCTCGCGGAC GATCTCACCG GTGCCGCGGA CTGCGCGATC 
GCCTTCGGTC GAAGGGGACG CGCGGCTGCG GTGACCTGGG GAGAAGCCGA CGCCGCGCAG
GATCACCAGC TGCCGGTGCT GGCCTATGAC GCAGCGAGCC GCGGCCTCAG CGCCGCGGAC
GCCGCCCGCC GCCACGCCGA GGTGCTGACG CAGTTGGCCG CGGCGGAGCG TATCCTGTTC
AAGAAGATCG ACTCGACGTT GCGCGGCCAG CCCGCCGCGG AAACCGCGGC GACGCTGTCC
TATCTGAAGT CCCGCCTGGG CGGCGCGTTC GGCGTGTTCG CGCCGGCGTT TCCGGCCACC
GGCCGCACCA CGATCGACGG CCGTATCGTG GTCGGCGGCC AGCCGCTCGA GCAGGCCGAA
GTCTGGCAGC GCGATCACTC CTATCCGACT GCCGATCTGG TCGACGTGCT GGCGAGTGCC
GGCGTGCGCG GCGAGAAAGT AACGTTGGCT GCCATCCGCG GCGGCGAGCT GCGCGCGGTG
TTCGCGAAGC TTTCGCGCCA GGGCGACGTC GTCGCGGTGT GCGATGCCGA GACCGACCAA
GATCTGCATC TGATCGCGGA CGCGAGCCTG CCGGCGTCGC CATCCACCTT CTTCATCGGC
AGCGGCGGGC TGGCGCACGC GCTGGCCGGG CTCGAGGCCG AGCATGCGGT TGCGCCGTTG
CGAATCCCGA CCAGCGCCCA CGGCACCCTG ATCGTGGTGG GGTCGCTCGC CGGCGCCTCG
CGCTCCGCCG CCTGCAAGCT GGTGGCGACC GGCACCGTGG CGCATTTCCC GGTGACGCCG
CAGACGCTGC TCAACGACGG CGGCGGCCGC GCCGAACTGG CGCTCGCCGT CATGCAACGC
TTGTCCGGCG GCGGCGATGC GCTGGTCGAG ATCGTGATGA ACGATCATCC CGACATGGCG
CTCGGCCCCA AGCTGGCGCA GCGACTGGCC GAAACGCTGC AAAGCGTCGC GCCGTCGATC
GGCGCCTTTG CCGCCACCGG CGGCGAAACC GCGGCGGCCC TGTTGGCGCG TTTCGGCGTC
AACGGCATTC GGCTCGCCGA CGAAATCGAG CCGGGCGTTT CGCTCGGCCT TACGCTGGGC
CGATTGTCGG TCCCGATCGC CACCAAGGCC GGCGCGTTCG GCGACGAACA GAGCTTGATC
CGTATCAGCG AACGGCTTGC CGCCGTTCGA ACCAAAGGAA GCTTCTCATG A
 
Protein sequence
MAHGWLILAD DLTGAADCAI AFGRRGRAAA VTWGEADAAQ DHQLPVLAYD AASRGLSAAD 
AARRHAEVLT QLAAAERILF KKIDSTLRGQ PAAETAATLS YLKSRLGGAF GVFAPAFPAT
GRTTIDGRIV VGGQPLEQAE VWQRDHSYPT ADLVDVLASA GVRGEKVTLA AIRGGELRAV
FAKLSRQGDV VAVCDAETDQ DLHLIADASL PASPSTFFIG SGGLAHALAG LEAEHAVAPL
RIPTSAHGTL IVVGSLAGAS RSAACKLVAT GTVAHFPVTP QTLLNDGGGR AELALAVMQR
LSGGGDALVE IVMNDHPDMA LGPKLAQRLA ETLQSVAPSI GAFAATGGET AAALLARFGV
NGIRLADEIE PGVSLGLTLG RLSVPIATKA GAFGDEQSLI RISERLAAVR TKGSFS