Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4425 |
Symbol | |
ID | 3970405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4932553 |
End bp | 4933329 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637927536 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_534267 |
Protein GI | 90425897 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.612915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.551599 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATGC GCAGCAAGGA GCGTCACGCC CGCCTGTTGG AAGCGCTGAA CGCCGGCGAG ATCGATATCG ACGACCTCGC GCGGCGGTTC GAGGTCTCCG CCTCCACGGT GCGGCGCGAT CTGCAGCAGC TCTCCAAGAT CAACGCGGTG CGCCGCACCT ATGGCGGCGC GATTCTCACC GGCCACGCCA TCGAGACCAC CTTCGAGCAG CGGCTCGCGG TCGATGGCGA CGCCAAGCAG GCGATCGCGC GCGCCGCGAT CGAGCTGATC GAGGACGGCG ACACGCTGAT CCTGGATGCC GGGTCGACGG TCGCAGCGTT CAGCCGGCTG CTGCTGCAGC GGCGGCTGCG CATCATCACC AACAATCTGG CGCTGTTGCC GTTTCTCGCC AAGGCGCCGG CGATCGAGCT GGTCGTGCTC GGCGGCGCGT TGCGCTCGAC CAGCATGAGC ACGATGGGGC CGCTCGCCAA CGAGGCGCTG CGCCGGCTGT CCGCGACCCG CGCCATCATG AGCGCCGACG GCGTGGTCGG CGGCCGCGGC TTGTGCGAGG CGGATCTCGA GCAGGTGGCG TTGAAGTCGC TGATGATGCA GCAGGCCAAG GAGCTGATCG TGCTCGCCGA CGCCAGCAAG CTCGGCCGCG CCGAACAATT GGCCTGGGCG CCGCTGCCGC CGCGCTGGAC GCTGGTCACC GACGCTGGCG CCTCCGAGCA GCAACGCCAA CGCCTCGCCG ATGCCGGCGC AAGGGTGATC GTCGCGCAGG GGTGCGTGGC TGCGTAG
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Protein sequence | MSMRSKERHA RLLEALNAGE IDIDDLARRF EVSASTVRRD LQQLSKINAV RRTYGGAILT GHAIETTFEQ RLAVDGDAKQ AIARAAIELI EDGDTLILDA GSTVAAFSRL LLQRRLRIIT NNLALLPFLA KAPAIELVVL GGALRSTSMS TMGPLANEAL RRLSATRAIM SADGVVGGRG LCEADLEQVA LKSLMMQQAK ELIVLADASK LGRAEQLAWA PLPPRWTLVT DAGASEQQRQ RLADAGARVI VAQGCVAA
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