| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4425 |
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| Symbol | |
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| ID | 3970405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4932553 |
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| End bp | 4933329 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927536 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_534267 |
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| Protein GI | 90425897 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.612915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.551599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATGC GCAGCAAGGA GCGTCACGCC CGCCTGTTGG AAGCGCTGAA CGCCGGCGAG
ATCGATATCG ACGACCTCGC GCGGCGGTTC GAGGTCTCCG CCTCCACGGT GCGGCGCGAT
CTGCAGCAGC TCTCCAAGAT CAACGCGGTG CGCCGCACCT ATGGCGGCGC GATTCTCACC
GGCCACGCCA TCGAGACCAC CTTCGAGCAG CGGCTCGCGG TCGATGGCGA CGCCAAGCAG
GCGATCGCGC GCGCCGCGAT CGAGCTGATC GAGGACGGCG ACACGCTGAT CCTGGATGCC
GGGTCGACGG TCGCAGCGTT CAGCCGGCTG CTGCTGCAGC GGCGGCTGCG CATCATCACC
AACAATCTGG CGCTGTTGCC GTTTCTCGCC AAGGCGCCGG CGATCGAGCT GGTCGTGCTC
GGCGGCGCGT TGCGCTCGAC CAGCATGAGC ACGATGGGGC CGCTCGCCAA CGAGGCGCTG
CGCCGGCTGT CCGCGACCCG CGCCATCATG AGCGCCGACG GCGTGGTCGG CGGCCGCGGC
TTGTGCGAGG CGGATCTCGA GCAGGTGGCG TTGAAGTCGC TGATGATGCA GCAGGCCAAG
GAGCTGATCG TGCTCGCCGA CGCCAGCAAG CTCGGCCGCG CCGAACAATT GGCCTGGGCG
CCGCTGCCGC CGCGCTGGAC GCTGGTCACC GACGCTGGCG CCTCCGAGCA GCAACGCCAA
CGCCTCGCCG ATGCCGGCGC AAGGGTGATC GTCGCGCAGG GGTGCGTGGC TGCGTAG
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| Protein sequence | MSMRSKERHA RLLEALNAGE IDIDDLARRF EVSASTVRRD LQQLSKINAV RRTYGGAILT
GHAIETTFEQ RLAVDGDAKQ AIARAAIELI EDGDTLILDA GSTVAAFSRL LLQRRLRIIT
NNLALLPFLA KAPAIELVVL GGALRSTSMS TMGPLANEAL RRLSATRAIM SADGVVGGRG
LCEADLEQVA LKSLMMQQAK ELIVLADASK LGRAEQLAWA PLPPRWTLVT DAGASEQQRQ
RLADAGARVI VAQGCVAA
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