| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4421 |
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| Symbol | |
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| ID | 3970400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4928387 |
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| End bp | 4930105 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927531 |
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| Product | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_534263 |
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| Protein GI | 90425893 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG0492] Thioredoxin reductase
[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTC AGCCCGCAGA GCCCGCAGAC GACAGCCCCC CGGACAATGC CTCGCGCTCG
GCGATGCATC CGCGGCATGA ACAGACCTTC CCCAGCCTGA CGCCGGCCGA GATCGCCCGG
ATCCGCCGGT TCGGCGAACT CCGGCGCTAT CACGATGGCG ACACGCTGTT CGAGACCGGC
AAGACCGGCC CCGGCATGTT CGTCATCCTC GACGGTCACG TCGCCATCAC CCAGCGCGAC
GGCCTTGGCC ATATCACCCC GGTGGTCGAG CAGGGCCCTG GGCAGTTCTT GGGCGAACTC
GGGCAATTGT CCAACCGCTA CGCGCTGGTC GACGGCCATG CCGAGGGCGA GGTCGAATGC
CTGCTGATCC CGCCGGAGCG GCTGCGCGCG CTGCTGGTGG CCGAAGCCGA CCTCGGCGAG
CGCATCATGC GGGCGCTGAT CCTACGCCGC GTCAGCCTGA TCCAGGGCGG CGTCGGCGGC
CCGGTGCTGA TCGGCGCGCC GAATTCCGGC GACCTGGTGC GGCTGCAGGG CTTCCTCACC
CGCAACGGTT ATCCGCATCA CCTGCTCGAT CCGGCGCAGG ACAAGGACGC CGCCGATCTG
GTGGCGCGCG CGGCGCCGCA GCCGTCCGAT CTGCCGCTGG TGGTGACGCC GGACGGCAGC
ATCCTGCGCA ATCCCTCCGA GAGCGACGTC GCCCGCGCCA TGGGCATGCT GGGCGCCGTC
AGCCCCGATA AATTGTACGA CGTGGCGATC GTCGGCAGCG GCCCCGCGGG GCTGTCGACC
GCGGTCTATG CCGCCTCCGA GGGGCTGTCG GTGGCGGTGC TCGATGCGCG GGCGTTCGGC
GGCCAGGCCG GCGCCAGCGC CCGGATCGAG AACTATCTCG GCTTCCCGAC CGGGATCTCC
GGCCTGGCTT TGACCGCGCG GGCCTACAAC CAGGCGCAGA AATTCGGCGC CGAGATCATG
ATCCCGGTGT CGGTGAAGAC ATTGCAATGC GGCTGCGACG ACGGCACCTT TGCGCTGACG
CTGGACGACG GCGCGCCGTT GCGGGCGAAG TCGATCGTGG TGGCGAGCGG CGCCCGCTAT
CGCCGGCCGC GGATCGACAA TCTCGACAAG TTCGAAGGCC GCGGCGTGTG GTACTGGGCC
TCGCCGATCG AGGCCCGGCT GTGCAAGGAC CAGGAGGTGA TCCTGGTCGG CGGCGGCAAT
TCCGCAGGGC AAGCCGCGGT GTTCCTGTCG GCGCATGCCA GCAAGGTGCA CATGGTGATC
CGCGGCGGCG GGCTCGGCGC CAGCATGTCG CGCTATCTGA TCGAGCGGAT CGAATCGACG
CCGAACATCG AGCTTCTGTT CAATACCGAG ATCGTGTCGC TCGAAGGCGC GGCCGACGCC
ACGCTAGAGC GCGCGCAATT GCGCAGCCGG CTGTCCGGCG AGGCGAGCTG GAGCAATATC
CGCAACGTGT TCCTGTTCGT CGGCGCCGAC CCCGCCACCG GCTGGCTCGA CGGCTGCGGC
GTGGCGCTCG ACCGCGCCGG CTTCGTCATC ACCGGGGCGG CATACGAGCA GCGGCCGGCG
ACGCCGCTGG AGACCTCGGT GCCCGGCGTA TTCGCGGTCG GCGACGTGCG CTCCGGCTCG
GTCAAGCGGG TCGGTGGCGC GATCGGCGAG GGCGCCCAGG TGGTGGCGTC GCTGCACGGT
TACCTCGCCG ACGCAACCGC GGCGGCACCG CCGGTATGA
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| Protein sequence | MSLQPAEPAD DSPPDNASRS AMHPRHEQTF PSLTPAEIAR IRRFGELRRY HDGDTLFETG
KTGPGMFVIL DGHVAITQRD GLGHITPVVE QGPGQFLGEL GQLSNRYALV DGHAEGEVEC
LLIPPERLRA LLVAEADLGE RIMRALILRR VSLIQGGVGG PVLIGAPNSG DLVRLQGFLT
RNGYPHHLLD PAQDKDAADL VARAAPQPSD LPLVVTPDGS ILRNPSESDV ARAMGMLGAV
SPDKLYDVAI VGSGPAGLST AVYAASEGLS VAVLDARAFG GQAGASARIE NYLGFPTGIS
GLALTARAYN QAQKFGAEIM IPVSVKTLQC GCDDGTFALT LDDGAPLRAK SIVVASGARY
RRPRIDNLDK FEGRGVWYWA SPIEARLCKD QEVILVGGGN SAGQAAVFLS AHASKVHMVI
RGGGLGASMS RYLIERIEST PNIELLFNTE IVSLEGAADA TLERAQLRSR LSGEASWSNI
RNVFLFVGAD PATGWLDGCG VALDRAGFVI TGAAYEQRPA TPLETSVPGV FAVGDVRSGS
VKRVGGAIGE GAQVVASLHG YLADATAAAP PV
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