Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4420 |
Symbol | |
ID | 3970399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4927153 |
End bp | 4927977 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637927530 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_534262 |
Protein GI | 90425892 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGACGA TCACCAGCAA GGACGGCATC GACATCTACT ACAAGGATTG GGGCTCCGGG CAACCGATCG TGTTCAGCCA CGGCTGGCCG CTGTCGGCGG ACGATTGGGA TCCGCAACTG CTGTTCTTCT TGAGCAAGGG GTTCCGGGTG ATCGCCCATG ACCGCCGCGG TCACGGCCGT TCCAGCCAGA CCGCCGACGG TCACGACATG GATCACTACG CCGACGATCT GGCGGCGCTC ACCGCGCATC TCGACCTCAA CGACGCCGTG CATATCGGTC ACTCCACCGG CGGCGGCGAG GTGGTGCACT ATCTGGCGCG CCACGGCGAG AGCCGCGCCG CCAAAGCGGT GCTGATCGGC GCGGTGCCGC CGATCATGGT GAAGACCGAA AGCAATCCCG GCGGGCTGCC GAAGCAAGTG TTCGACGGCT TGCAAGTGCA GGTCGCCACC AACCGCGCGC AGTTCTATCG CGACCTGCCG TCGGGGCCGT TCTACGGCTT CAACCGGCCG GGCGTCGCCG CGCAGGAAGG CCTCATCCAG AACTGGTGGC GGCAGGGCAT GATGGGCGGC GCCAAGGCGC ATTACGACGG CATCGTCGCG TTCTCGCAGA CCGACTTCAC CGACGACCTG AAGAAGCTCA CCTTGCCGGT GCTGGTGCAG CATGGCGACG ACGACCAGGT GGTGCCTTAC GAGGATTCCG CGCCGCTCAC CGCCAAGTTG TTGCAAAACG GCACGCTGAA AACCTACCAA GGCTTTCCGC ACGGCATGAT CACCACCCAG GCCGAGACCA TCAACGCCGA CATCCTGGCC TTCATCACCG GCTAA
|
Protein sequence | MATITSKDGI DIYYKDWGSG QPIVFSHGWP LSADDWDPQL LFFLSKGFRV IAHDRRGHGR SSQTADGHDM DHYADDLAAL TAHLDLNDAV HIGHSTGGGE VVHYLARHGE SRAAKAVLIG AVPPIMVKTE SNPGGLPKQV FDGLQVQVAT NRAQFYRDLP SGPFYGFNRP GVAAQEGLIQ NWWRQGMMGG AKAHYDGIVA FSQTDFTDDL KKLTLPVLVQ HGDDDQVVPY EDSAPLTAKL LQNGTLKTYQ GFPHGMITTQ AETINADILA FITG
|
| |