Gene RPC_4420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4420 
Symbol 
ID3970399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4927153 
End bp4927977 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content65% 
IMG OID637927530 
Productalpha/beta hydrolase fold 
Protein accessionYP_534262 
Protein GI90425892 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA TCACCAGCAA GGACGGCATC GACATCTACT ACAAGGATTG GGGCTCCGGG 
CAACCGATCG TGTTCAGCCA CGGCTGGCCG CTGTCGGCGG ACGATTGGGA TCCGCAACTG
CTGTTCTTCT TGAGCAAGGG GTTCCGGGTG ATCGCCCATG ACCGCCGCGG TCACGGCCGT
TCCAGCCAGA CCGCCGACGG TCACGACATG GATCACTACG CCGACGATCT GGCGGCGCTC
ACCGCGCATC TCGACCTCAA CGACGCCGTG CATATCGGTC ACTCCACCGG CGGCGGCGAG
GTGGTGCACT ATCTGGCGCG CCACGGCGAG AGCCGCGCCG CCAAAGCGGT GCTGATCGGC
GCGGTGCCGC CGATCATGGT GAAGACCGAA AGCAATCCCG GCGGGCTGCC GAAGCAAGTG
TTCGACGGCT TGCAAGTGCA GGTCGCCACC AACCGCGCGC AGTTCTATCG CGACCTGCCG
TCGGGGCCGT TCTACGGCTT CAACCGGCCG GGCGTCGCCG CGCAGGAAGG CCTCATCCAG
AACTGGTGGC GGCAGGGCAT GATGGGCGGC GCCAAGGCGC ATTACGACGG CATCGTCGCG
TTCTCGCAGA CCGACTTCAC CGACGACCTG AAGAAGCTCA CCTTGCCGGT GCTGGTGCAG
CATGGCGACG ACGACCAGGT GGTGCCTTAC GAGGATTCCG CGCCGCTCAC CGCCAAGTTG
TTGCAAAACG GCACGCTGAA AACCTACCAA GGCTTTCCGC ACGGCATGAT CACCACCCAG
GCCGAGACCA TCAACGCCGA CATCCTGGCC TTCATCACCG GCTAA
 
Protein sequence
MATITSKDGI DIYYKDWGSG QPIVFSHGWP LSADDWDPQL LFFLSKGFRV IAHDRRGHGR 
SSQTADGHDM DHYADDLAAL TAHLDLNDAV HIGHSTGGGE VVHYLARHGE SRAAKAVLIG
AVPPIMVKTE SNPGGLPKQV FDGLQVQVAT NRAQFYRDLP SGPFYGFNRP GVAAQEGLIQ
NWWRQGMMGG AKAHYDGIVA FSQTDFTDDL KKLTLPVLVQ HGDDDQVVPY EDSAPLTAKL
LQNGTLKTYQ GFPHGMITTQ AETINADILA FITG