| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4396 |
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| Symbol | |
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| ID | 3970411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4898585 |
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| End bp | 4900495 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927505 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_534238 |
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| Protein GI | 90425868 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.185753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCC ATGAAAACAG CCGCTATCGC GAGGTCCACG CCCGATCGCT CGCCGACCCG
GAAGGTTTCT GGGGCGAGGC GGCGCGTGAG ATCGACTGGA TCAAGCCCGC CGACAAGGTG
TTCGACGCCT CGCTCGGGCT GTATGGCCGC TGGTTTGCCG GCGCCCAGGT CAACACCTGC
TACAACGCAC TCGACCGCCA CGTCGAACGC GGCCGCGCCG ATCAGCTGGC GCTGATCCAC
GATTCGCCCT TGACCGGCAC CGTCACCAAA CTGACTTACG CGCAATTACT CGAGGAAGTC
GCGACGCTCG CCGCGGTGAT GCAGGATTTC GGCGTCGCCA AGGGCGACCG CGTCATCCTC
TATATGCCGA TGGTGCCGGA GGCGATGGTG GCGATGCTGG CCTGCGCCCG GATCGGCGCG
GTGCATTCGG TGGTGTTCGG CGGCTTCGCG TCGAAGGAAC TCGCCACGAG GATCGACGAC
GCCAAGCCGA AGCTGATCCT GTCGGCGAGT TGCGGCATCG AGCCCGGCCG CATCGTCAAG
TACAAGCCGT TGCTCGACGA CGCCATCGCG CTGTCGGCAG CACCTCCGCA GGCCTGCATC
ATCCTGGAGC GGCCGCAGCA GACCTGCGAA CTCACCCCCG GCCGCGATCA CGACTGGGCC
AGCTTGCGCG CCGCTGCACT CGCCGCCGGC AAGAAGGCCG ATTGCGTGGC GGTCGAGGCC
ACCGACCCGC TGTATATCCT CTACACCTCC GGCACCACCG GCAAGCCGAA GGGCGTGGTG
CGCGACAATG GCGGCCACCT CGTCGCGCTG AAATGGACCA TGGAAAATCT CTACGGCGTC
AAGCCCGGCG AAGTCTGGTG GTGCGCCTCC GACATCGGCT GGGTGGTCGG CCACAGCTAC
ATCATCTACG GCCCGCTGAT TCACGGCGCG ACCTCGATCA TGTATGAGGG CAAGCCGGTC
GGCACCCCGG ATGCCGGCGC GTTCTGGCGG GTCATTGCGG ACTACGGCGC GGTGGCGCTG
TTCACCGCGC CGACCGCGTT CCGCGCCATC CGCAAGGAAG ACCCGGACGG CACCTTCTTC
GGCAAATACG ATCTGTCGAA GCTGCGCACC CTGTTCCTGG CCGGCGAGCG CGCCGATCCG
CCGACGGTGG AATGGGCCGA AGAGATGCTG CACGTGCCGG TGATCGATCA CTGGTGGCAG
ACCGAAACCG GTTGGTGCAT CGCCGGCAAT CCGGTTGGGC TCGGGCTGTT GCCGGTCAAG
CACGGCTCGC CGACCGTGCC GATGCCGGGC TACGATATCA AGGTGGTCGA CGAGGCAAGC
CATCCGGTGC CGCTCGGCAC CATGGGCTCG ATCGTGATCA AGCTGCCGCT GCCGCCCGGC
AACCTGCCGA CGCTGTGGCA GCAGGACGAG CGCTGCCGGG AAAGCTACTT CATCGATTAC
CCCGGCTACT ACAAGACCTC GGACGCCGGC TACATGGACG AGGACGGCTA CGTCTTCGTG
ATGGGCCGCA CCGACGACAT CATCAACGTC GCCGGCCACC GGCTCTCCAC CGGCGGCATG
GAGGAAATTC TCGCCTCCCA TCCCGACGTC GCCGAATGCG CGGTGCTCGG CATCAACGAC
CCCATCAAGG GCGAGGTGCC GTGCGGCTTC CTGGTGTTGA AGGCCGGCGT CACCCGCGAC
GCCGTCACCA TCGAGCAGGA AGTGGTCAAG CTGGTGCGCG ACAAGCTCGG GCCGGTCGCG
GCGTTCAAGC TCGCCATTAC GGTCGGCCGG CTGCCGAAAA CCCGCTCCGG CAAGATTCTT
CGCGGCACGA TCAAGAAGAT CGCCGATGGC GAGGAATGGG CGATGCCGGC GACCATCGAG
GACCCGAAGG CGCTCGACGA GATCAGCGAC GCGTTCAAGA GCCACGGCTG A
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| Protein sequence | MNIHENSRYR EVHARSLADP EGFWGEAARE IDWIKPADKV FDASLGLYGR WFAGAQVNTC
YNALDRHVER GRADQLALIH DSPLTGTVTK LTYAQLLEEV ATLAAVMQDF GVAKGDRVIL
YMPMVPEAMV AMLACARIGA VHSVVFGGFA SKELATRIDD AKPKLILSAS CGIEPGRIVK
YKPLLDDAIA LSAAPPQACI ILERPQQTCE LTPGRDHDWA SLRAAALAAG KKADCVAVEA
TDPLYILYTS GTTGKPKGVV RDNGGHLVAL KWTMENLYGV KPGEVWWCAS DIGWVVGHSY
IIYGPLIHGA TSIMYEGKPV GTPDAGAFWR VIADYGAVAL FTAPTAFRAI RKEDPDGTFF
GKYDLSKLRT LFLAGERADP PTVEWAEEML HVPVIDHWWQ TETGWCIAGN PVGLGLLPVK
HGSPTVPMPG YDIKVVDEAS HPVPLGTMGS IVIKLPLPPG NLPTLWQQDE RCRESYFIDY
PGYYKTSDAG YMDEDGYVFV MGRTDDIINV AGHRLSTGGM EEILASHPDV AECAVLGIND
PIKGEVPCGF LVLKAGVTRD AVTIEQEVVK LVRDKLGPVA AFKLAITVGR LPKTRSGKIL
RGTIKKIADG EEWAMPATIE DPKALDEISD AFKSHG
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