Gene RPC_4378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4378 
Symbol 
ID3970432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4883009 
End bp4883797 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content61% 
IMG OID637927487 
Producthypothetical protein 
Protein accessionYP_534220 
Protein GI90425850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.796058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0281259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC CAGCAGTGAT TGTTGTGGGT GCCGACAAAG GCGGCGTCGG AAAAACCACG 
GTCTCGCGCA CCTTGCTCGA CTATTTCAGC GCCAACAACG TGCCGACCCG GGCGTTCGAC
ACCGAATCGC CGCGCGGCAC CCTGAAGCGC TTCCATCCCG ACATCACCGA GATCGTCGAC
ATGACGACGA CCGCGGACCA GATGAAGATC TTCGACACGC TGAATTCGGC GTCGCCGTCG
GTGACGGTGA TCGACGTCCG CGCCGGACTG ATGTCCAACG CGCTGGCGAA TCTGCGCGAC
ATCGGCTTTC TCGACGCCGC GAAATCCGGC CAGATCACCT TCGCGGTGTT CCATATACTG
GGACCCTCGA TCGCATCCTT GGACGAGATC GCCGAGACCG CGGGCTTCAT GCAGGGCGCC
AAATACTTCC TGGTGAAGAA CTTCATCAAC AACACCAGCT TCTTCGAGTG GGACCAGGCG
ACCTACAATT CGTACTTCCA CCGCATCAAG GACGCCACCG AGCTGGTGAT CCCGAAGCTC
AACGAGATGG CCTACGAGCA GGTCGAGGTC TCGTCGGTGC CGTTCCTGAA ATTCGTCGCC
AACAAGGGCA CCCAGGACGA GCCGGCGAAT TACTCCTTCG TGTTGCGCGG CTATGTCCGG
CACTGGCTCG CCAACGTCTG GAGCGAGTTC GACCGCATCA AATTGACCGA CATTGTCGGC
AAGGAAAAGC CGACCGGCCG GCCGCCGAGC AACGCCGTGG CGGGCGGCGT CCACGACGGT
GAGAAATAG
 
Protein sequence
MAKPAVIVVG ADKGGVGKTT VSRTLLDYFS ANNVPTRAFD TESPRGTLKR FHPDITEIVD 
MTTTADQMKI FDTLNSASPS VTVIDVRAGL MSNALANLRD IGFLDAAKSG QITFAVFHIL
GPSIASLDEI AETAGFMQGA KYFLVKNFIN NTSFFEWDQA TYNSYFHRIK DATELVIPKL
NEMAYEQVEV SSVPFLKFVA NKGTQDEPAN YSFVLRGYVR HWLANVWSEF DRIKLTDIVG
KEKPTGRPPS NAVAGGVHDG EK