Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4378 |
Symbol | |
ID | 3970432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4883009 |
End bp | 4883797 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637927487 |
Product | hypothetical protein |
Protein accession | YP_534220 |
Protein GI | 90425850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.796058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0281259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGC CAGCAGTGAT TGTTGTGGGT GCCGACAAAG GCGGCGTCGG AAAAACCACG GTCTCGCGCA CCTTGCTCGA CTATTTCAGC GCCAACAACG TGCCGACCCG GGCGTTCGAC ACCGAATCGC CGCGCGGCAC CCTGAAGCGC TTCCATCCCG ACATCACCGA GATCGTCGAC ATGACGACGA CCGCGGACCA GATGAAGATC TTCGACACGC TGAATTCGGC GTCGCCGTCG GTGACGGTGA TCGACGTCCG CGCCGGACTG ATGTCCAACG CGCTGGCGAA TCTGCGCGAC ATCGGCTTTC TCGACGCCGC GAAATCCGGC CAGATCACCT TCGCGGTGTT CCATATACTG GGACCCTCGA TCGCATCCTT GGACGAGATC GCCGAGACCG CGGGCTTCAT GCAGGGCGCC AAATACTTCC TGGTGAAGAA CTTCATCAAC AACACCAGCT TCTTCGAGTG GGACCAGGCG ACCTACAATT CGTACTTCCA CCGCATCAAG GACGCCACCG AGCTGGTGAT CCCGAAGCTC AACGAGATGG CCTACGAGCA GGTCGAGGTC TCGTCGGTGC CGTTCCTGAA ATTCGTCGCC AACAAGGGCA CCCAGGACGA GCCGGCGAAT TACTCCTTCG TGTTGCGCGG CTATGTCCGG CACTGGCTCG CCAACGTCTG GAGCGAGTTC GACCGCATCA AATTGACCGA CATTGTCGGC AAGGAAAAGC CGACCGGCCG GCCGCCGAGC AACGCCGTGG CGGGCGGCGT CCACGACGGT GAGAAATAG
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Protein sequence | MAKPAVIVVG ADKGGVGKTT VSRTLLDYFS ANNVPTRAFD TESPRGTLKR FHPDITEIVD MTTTADQMKI FDTLNSASPS VTVIDVRAGL MSNALANLRD IGFLDAAKSG QITFAVFHIL GPSIASLDEI AETAGFMQGA KYFLVKNFIN NTSFFEWDQA TYNSYFHRIK DATELVIPKL NEMAYEQVEV SSVPFLKFVA NKGTQDEPAN YSFVLRGYVR HWLANVWSEF DRIKLTDIVG KEKPTGRPPS NAVAGGVHDG EK
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