| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4371 |
|---|
| Symbol | |
|---|
| ID | 3970848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4872884 |
|---|
| End bp | 4873363 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637927480 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_534213 |
|---|
| Protein GI | 90425843 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5389] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0866118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0388954 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGC CCGGCCGAAG TTCCGCCAAG CCGTTGTCCG TCCTGCTCGG CGGGGTGTTT
TCCGACGCCT TCGCGCGGCA GGGCTTTGCC TCGCGCGAAT TGGTGGCGCG CTGGGCCGAG
ATCGCCGGCC CCGAGGTCGC CGAATTCGCC GAGCCGATCA GGATCCAGTG GCCGCGCCCG
GTCGAGGGAC AACAGACCCA ACCGGCGACG CTGATCCTGC GGGTCGAAGG CCCGATGGCG
TTGGAAATCC AGCACGCCTC CGACGTCATC CTGCAGCGGG TCAACCGGTT TTTCGGGTGG
AATGCGGTCG CCAAACTGGC GCTGCGGCAG GCGCCGCTGT CGCGGCGGCG CAAGCCGAAA
CCGCCGCCGG GCCCCGATCC CGAAGCGGTC GCCGCCTTGG CGCAGACCTT GGGCTCGGTG
GAGGACGAGG AGCTGCGCAG CGCGCTGGCC CGGCTCGGCG CCTCGATCAA GCGAAGGTGA
|
|---|
| Protein sequence | MLKPGRSSAK PLSVLLGGVF SDAFARQGFA SRELVARWAE IAGPEVAEFA EPIRIQWPRP
VEGQQTQPAT LILRVEGPMA LEIQHASDVI LQRVNRFFGW NAVAKLALRQ APLSRRRKPK
PPPGPDPEAV AALAQTLGSV EDEELRSALA RLGASIKRR
|
|---|
| |