| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4342 |
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| Symbol | |
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| ID | 3971222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4840539 |
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| End bp | 4841969 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927451 |
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| Product | cell wall hydrolase, SleB |
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| Protein accession | YP_534184 |
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| Protein GI | 90425814 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0925547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGTCA TGCGTAACCG GCCGAAGGGC GCGAAATTTG CGTCCTTCGG TCTTGGTCTT
TGCGTCTTCG CATTGATCCC GTCAGAGCTC GGATATCAGG ATATCGCGTC GCTGCTCGCC
CGGCAGCCCG GCGTCGCCGA GCGCTGGCAG AAGCGGGTGT TCTCCTCGTC GGTCGCCACC
ATCCAGCTCG CGACGTTTTC GTTCGGCCGC CCGATCGGCA CCTCGTTGCC GCCGAGCGCC
GACGTGCAGC TCGCCAGTCT CGACCATCGA ACCCGCGACA TCACCGGTTC GCTGACGCGC
AATCCGCTGG CGCAGCCGCC TGGCCGTTAC GAGGCCGCGG ACTTTCCCAA GGTCGATCGC
ACCTTGAAAG GCGATCGCCT CGCTACGGTG ACGCCGGACA CCACGCCGAT CGAGACTTCG
CCGTCGTCGC AGGACGATTC CGCGGCACCC AACGTCGCCG GCGCCAAGAC CGCGGCGCAA
TTGCCGGCCG GGCCGGCCGC CCCGCTCGAT CCCGAACTCG CCGAAGCCTT GCAGGCGCCG
CCGCTGTCGC AATACGACGT GTCGTTGTCG CTGGAGGCGC AGCCGCTCGG CGACGCCAGC
ATCGGCGCGC CGACGGTGGC GCCGGCGCAT GACGGCTTTT CGGTGAAGAC CTCCAGCCTG
TTCTTCGGCA GTTCGTCGCT CGGCGCGCCC GGTGAGAGCA TGGAGCAATG GCAGCCCGGC
GAGGAGCCGA TGATCGTGCT GCCGACCGGC ATCGATCCCG ACATGAAGGT GACGGCGGCG
TTGCCGGAGA CGGCTGCGCC AAGCGAGGCC GCCAAGGCGG GCGAAAGCAT CGCCAGCAAG
GGCGAAGTCA ACGCCGACAA TCAGCGGGTC AAGACCCCGG CGGAGCGGCT CGGCCTGTTC
GACGCCAAGC TGCGCGCCAA GCACGAGAAG TGCCTGACCG ACGCGATCTA TTTCGAAGCC
CGCGGCGAAG CGGTGCGCGG CCAGATCGCG GTGGCGCAGG TGGTGCTGAA CCGCGCGTTC
TCCGGCTTCT ATCCCAGCAA TGTCTGCGGC GTGGTGTATC AGAACAAGCA CCGCCATCTG
GCCTGTCAGT TCACCTTCGC CTGCGACAAC GTCGCCGACG TGGTGCGCGA ACCCGACATG
TGGGACCGCG CCAAGAAGAT CGCCAAAGCC TCGCTCGACG GCCAGCTGTG GCTGCCGGAA
GTCGGCAAGT CGACGCACTA TCACGCCTAT TGGGTGCGGC CGTCCTGGGT GCACGAAATG
AAGAAGATGT ACAAATTCGG CGTGCACACC TTCTATCGGC CGCGCAATTG GGGCGACGGC
AGCGACGCGC CGAGCTGGGG CAACTCGGCG GAAACCGCGG CGATCTCCGC CAAACTCGCC
GAAGTCGGCA AGAGCTCGGC GGAAATTACG AGTGCCTCCG AGCGGCGCTG A
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| Protein sequence | MSVMRNRPKG AKFASFGLGL CVFALIPSEL GYQDIASLLA RQPGVAERWQ KRVFSSSVAT
IQLATFSFGR PIGTSLPPSA DVQLASLDHR TRDITGSLTR NPLAQPPGRY EAADFPKVDR
TLKGDRLATV TPDTTPIETS PSSQDDSAAP NVAGAKTAAQ LPAGPAAPLD PELAEALQAP
PLSQYDVSLS LEAQPLGDAS IGAPTVAPAH DGFSVKTSSL FFGSSSLGAP GESMEQWQPG
EEPMIVLPTG IDPDMKVTAA LPETAAPSEA AKAGESIASK GEVNADNQRV KTPAERLGLF
DAKLRAKHEK CLTDAIYFEA RGEAVRGQIA VAQVVLNRAF SGFYPSNVCG VVYQNKHRHL
ACQFTFACDN VADVVREPDM WDRAKKIAKA SLDGQLWLPE VGKSTHYHAY WVRPSWVHEM
KKMYKFGVHT FYRPRNWGDG SDAPSWGNSA ETAAISAKLA EVGKSSAEIT SASERR
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