Gene RPC_4332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4332 
Symbol 
ID3971520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand+ 
Start bp4829757 
End bp4830383 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content62% 
IMG OID637927441 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_534174 
Protein GI90425804 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.239227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG CGGTGCGGCA CAGCGACGGG CTGACGCGAT GCCCATGGCC GGGAGAAGAC 
CCGCTCTATG TCGCCTATCA CGACAGCGAA TGGGGCGTGC CGGAATATGA CGACCGCGCG 
CTGTTCGAAA AGCTGATCCT CGACGGCTTC CAGGCCGGGC TGTCCTGGAT CACTATCCTG 
CGCAAACGCG ACAATTTCCG CAAAGCCTTC GACGATTTCC TCCCCGAGAA GATCGCGCGC 
TACGACGCGG AGAAGGTCCA CGCGCTGATG AACGACGCCG GCATCGTGCG CAACCGCGCC 
AAGATCGAAG GCACCATCAA CAGCGCCAAG TCCTATCTGG AGATCATGGA AAAAGGCCCC 
GGCTTCTCAA GCCTGTTGTG GGACTTCGTC GACGGCAAGC CCCTGGTCAA CAATTTCAAA 
TCCACCGCCA GCGTGCCGGC GGCGACGCCG CTGTCCGCCG CGATGTCGAA AGAGTTGTTG 
TCGCGCGGCT TCAAATTCGT CGGCCCGACC ATCGTCTACG CGTTCATGCA GGCCACCGGC 
CTCGTCAACG ATCATCTGGT GAGCTGCTTC TGTCACGAGC GCTGCGGCGC GATGAAACGG 
CCGGCGGCGA AGGCTAAGCG CAAGTAA
 
Protein sequence
MTRAVRHSDG LTRCPWPGED PLYVAYHDSE WGVPEYDDRA LFEKLILDGF QAGLSWITIL 
RKRDNFRKAF DDFLPEKIAR YDAEKVHALM NDAGIVRNRA KIEGTINSAK SYLEIMEKGP 
GFSSLLWDFV DGKPLVNNFK STASVPAATP LSAAMSKELL SRGFKFVGPT IVYAFMQATG 
LVNDHLVSCF CHERCGAMKR PAAKAKRK