Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4318 |
Symbol | |
ID | 3971506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4817300 |
End bp | 4818163 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637927427 |
Product | modD protein |
Protein accession | YP_534160 |
Protein GI | 90425790 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
TIGRFAM ID | [TIGR01334] putative molybdenum utilization protein ModD |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0022213 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0469871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCATT CCCTGTCGAC CGCAGCCAGC CGCGCCGAAC TCGAGCGCCT CTTGGCCGAT GACGTGCCCT ATGGCGACCT CACCACCGAG GCGCTCGGCA TCGGCGCCGC TTTCGGCCGC ATGACATTTT CGGCGCGCGA TCCGATGCTG CTGGCGCTCG CCGAAGACGC CGCCGCGATC ATCGAACTGG CCGGCGGCCG GGTCGAACTT TTTGCCGCGT CGGGCACAAG GCTGGCGCCC GGCGCGCCGA TCCTCGCCGC GCAGGGGCTG GCCTCGGCGC TGCTGAAAGG CTGGAAGGTG GCGCAGACCC TGATCGAGAT CTGGTCCGGC GTCGCCAGCT CCGCGCGCGA CATCGTCGAT GCCGCAACAG CGGTCTCGCC CGGCATCGTG GTCGCCTGCA CCCGCAAGAA TACCCCCGGC ACCAAGCGCT TCGCGGTGGC GGCGGTGAAG GCCGGCGGCG CGGTGATGCA TCGGCTGGGG CTGTCGGAAA CGCTGCTGGT GTTCGCCGAA CATCGCGGCT TTCTCGGCGA CGAGCCGCTG GCCGCAACCG CGGCGCGGCT GCGGCGCGGC GCGCCGGAAA AGAAAGTGGT GATCGAAGTC GGCTCGGTGG AGGCCGGCGT GGCGGCGGCC GAAGCCGGCT TCGACGTGAT CCAGGCGGAG AAATTCGCGC CATCGGACAT CGCAGCGCTG CTGGCCCGGC TGGCCGCAAT GCCGCGCCGG CCGGTGATCG CCGCCGCCGG CGGCGTCAAT CCCGGCAATG CCGCGGCCTA TGCGCAGGCC GGCGCCGATC TGTTGGTGAC CTCCGCGCCC TATCTGGCGA AGCCGCGCGA CGTCCAGGTG CGCATCGCGC CATTGCCGCG ATGA
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Protein sequence | MSHSLSTAAS RAELERLLAD DVPYGDLTTE ALGIGAAFGR MTFSARDPML LALAEDAAAI IELAGGRVEL FAASGTRLAP GAPILAAQGL ASALLKGWKV AQTLIEIWSG VASSARDIVD AATAVSPGIV VACTRKNTPG TKRFAVAAVK AGGAVMHRLG LSETLLVFAE HRGFLGDEPL AATAARLRRG APEKKVVIEV GSVEAGVAAA EAGFDVIQAE KFAPSDIAAL LARLAAMPRR PVIAAAGGVN PGNAAAYAQA GADLLVTSAP YLAKPRDVQV RIAPLPR
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