| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4294 |
|---|
| Symbol | |
|---|
| ID | 3971574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4793383 |
|---|
| End bp | 4794546 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637927402 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_534136 |
|---|
| Protein GI | 90425766 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.726241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0230577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGCG TCGCGCCCGT CGTTCCCATC CCCCACAACA GCCAGCTCGA AGCCCGTACC
CGCGGCTTCG ACGCGCTGCG CGGCAGCTTG ACGCTGCTGG TGCTGTTTCA CCATGCCGCC
ATCACCTACG GTGCCCCCGG CGGCTGGTTC TATCGCGAGA TCTCGCCCAA CGACTCGCCT
TCCTCGCAGC TCTTGATGCT GTTCGTGACG GTGAACCAAT CCTACTTCAT GGGCGTGTTT
TTCCTGCTGG CCGGGTATTT CACCCCCGGC GCGCTGCGGC ACAAGGGAGC GCGGCGCTTT
GTCCGCGACC GGCTGTGGCG GCTCGGGCTT CCGCTGTTGG TATTCGGCGT GCTGCTCGGC
CCGCTCACCG TGGCGCTGGC GTGGACCAGC AAGGGCTGGC CGGTGCTGCC GAGCCTGATT
TCGATCTGGC GCAGCGGGAC TTTCATCCCA GGGCCGCTGT GGTTCGCCGA AGCGCTGTTG
CTGTTCGGCT TTGCGGCGGT GCTGTGGCAT CTGCTGCTGC GCCGCCGCAG CGGCGCGGTT
GCGGTCAGCA AAGCGTTTCC TTCAAACAGA ACGCTCGCGA TCGCCGCCAT CGCCACCGGC
GCGACCTCCT TCGCGATCCG GCTGTGGTGG CCGGTCGGCA CCGCCTTCGC CGGCCTGCAA
TTCGGTTACT TCGCCGGCTA CGCGGTGCTG TTCGCCGCCG GCTGCATCGC CGCCGAGCAG
CGCTGGCTGG AGCGGATTCC GCCAGAAAGC GTTCGGCTGT GGTCGCGCGT GACGCTGCTC
TGCCTGCCGA TCCTGCCCGC CGTCGTCTAT CTCGGTGCCG CCGTTCCCGC GCTTCAGGAA
TCGCCCGAGG GCGGCCTCAA TCCGCTCGCC ATGCTCTATG CATTCTGGGA GCCGCTGGTC
GCCTGGGGCA TCATGCTGTG GCTGCTGACG GTCTATCAGC GGCGTTTTCC AAGGCTCGAC
GGGCTGTGGC GATCGCTGGC TGCGCGGGCC TATACGATCT ACATCATCCA TCCGCCGGTG
CTGGTCGGTG TGGCCCTGGC GTGGCGCGAG ACGGCGGCGC CGCTGCTGGT GAAATTCGCC
ATCACCGGGC TTGTGAGCTG CGCCATCTGC TTTTCCTCGG CCGGGCTGAT CCTGCGCATT
CCAGGTGCCC GCCGGATCCT GTGA
|
|---|
| Protein sequence | MDGVAPVVPI PHNSQLEART RGFDALRGSL TLLVLFHHAA ITYGAPGGWF YREISPNDSP
SSQLLMLFVT VNQSYFMGVF FLLAGYFTPG ALRHKGARRF VRDRLWRLGL PLLVFGVLLG
PLTVALAWTS KGWPVLPSLI SIWRSGTFIP GPLWFAEALL LFGFAAVLWH LLLRRRSGAV
AVSKAFPSNR TLAIAAIATG ATSFAIRLWW PVGTAFAGLQ FGYFAGYAVL FAAGCIAAEQ
RWLERIPPES VRLWSRVTLL CLPILPAVVY LGAAVPALQE SPEGGLNPLA MLYAFWEPLV
AWGIMLWLLT VYQRRFPRLD GLWRSLAARA YTIYIIHPPV LVGVALAWRE TAAPLLVKFA
ITGLVSCAIC FSSAGLILRI PGARRIL
|
|---|
| |