| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4290 |
|---|
| Symbol | |
|---|
| ID | 3971570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4788539 |
|---|
| End bp | 4789519 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637927398 |
|---|
| Product | Mg2+ transporter protein, CorA-like |
|---|
| Protein accession | YP_534132 |
|---|
| Protein GI | 90425762 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0598] Mg2+ and Co2+ transporters |
|---|
| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0188618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCGA TCTTCTCCCC GTCCCAATCC GCGTTGAAAA AATCCGCCGG CTCCGATCTG
TCCGAACTGC CCGCCGACGC GGTCTGGATC GACCTGGAGA AGCCGACCCC GGAAGAGGAC
CGCGCGGTGG AGCGGCTGGC GGGGGTGGCG GTGCCGACCC GGGAGGACAT GCAGGAGATC
GAGATTTCCA GCCGGCTCTA TATCGAGAAC GGCGCCCGTT ACATGACCGC GACGCTGGTC
TGCGCTGCCG ACACCAATTC GCCGCGGATC AGCCCGATCA CCTTCATCCT GTCCAACCAG
CGGCTGGTGA CGGTGCGCTA CGACGCGCCG AAGCCGTTCC TGCTGGTGGA AAACAAGCTG
GCGCGCGGCG TCGCCCCGGG CACCAACGGC GCCATGGTGC TGTTGGAATT GCTCGACGCG
GTGATCGACC GCTGCGCCGA CATTCTGGAG CGGGTCGGCG CCGACATCGA CCAGGTCAGC
CGCGACATTT TCGAGCCCGA CGCCTCGCTG CGCACCGGCC ACGCCAAGCG CTATTCCGAC
ATCCTGATCG CGATCGGCCG CAAGGGCGAT CTGACCTCGA AGGTGCGCGA AAGCCTGGTC
TCGATCGGCC GGCTCGTCAC CTTCGTCACC GCCGAGACCG AGGACGTCAA ATGGTCGAAG
GAGATGCGCG CGCAGCTCAA GACCATGCAG CGCGACGTCG GCTCCTTGAG CGACCACGCT
TCCTATCTGT CGAACAAGAT CACCTTCGTG CTGGATGCGA TGCTGGGCGT GGTCAACCTC
GAGCAGAACA ACATCATCAA GCTGTTCTCG GTGATGGCGG TGGTGCTGAT GCCGCCCACC
CTGATCGCCT CGGTCTACGG CATGAATTTC CGGCTGATGC CGGAATTGCA ATGGGAGCAC
GGCTACCCGA TGGCGCTCGC CATGATGCTG TGCGCCGCGG TGGTGCCGTA TCTGTTGTTC
AAGTGGAAGA AGTGGCTTTA G
|
|---|
| Protein sequence | MIAIFSPSQS ALKKSAGSDL SELPADAVWI DLEKPTPEED RAVERLAGVA VPTREDMQEI
EISSRLYIEN GARYMTATLV CAADTNSPRI SPITFILSNQ RLVTVRYDAP KPFLLVENKL
ARGVAPGTNG AMVLLELLDA VIDRCADILE RVGADIDQVS RDIFEPDASL RTGHAKRYSD
ILIAIGRKGD LTSKVRESLV SIGRLVTFVT AETEDVKWSK EMRAQLKTMQ RDVGSLSDHA
SYLSNKITFV LDAMLGVVNL EQNNIIKLFS VMAVVLMPPT LIASVYGMNF RLMPELQWEH
GYPMALAMML CAAVVPYLLF KWKKWL
|
|---|
| |