| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4275 |
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| Symbol | |
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| ID | 3971703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4768765 |
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| End bp | 4770852 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927384 |
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| Product | peptidase M23B |
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| Protein accession | YP_534118 |
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| Protein GI | 90425748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0353482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGGG ACGGCGGTTT GAGCCACAGG ACGACACGCG CGCGCAGCTA TGGACGCGAG
GCCGGGATCA TCGACCTCGG CCACGAGCCG CCGCTTTCCG TCGACGGATC CGAAGCCGCG
GTGATCGATC GGCGGCGCGT CTCGGTGCAA TGGTTCAGCG GCACGATTCT CACCGGCCTG
TGCGGCGCAG CCTTGATCGG CGGCGCCGTT TTCGCATCGC TGGACGGCGA AATGACCTTC
GCTAAAGTGC CGGAGCGCGT CGAAGGCGCG CTTCGCGGCG CGTTCGGCGC CAATGATCGC
AATGCCAGCC TGCACAAGAG CGACCGGCTG CCGCCGCCCT CCGAATCCGC CGCGGCGCGC
CAGGTGGTGC GGGTCTCCAC CGTCACCCGA ATCGGCAATC GTGACGTGAT GCGGGTGCGG
CCCTTCATTC GCATCGCCGG CAATCTGGCG CTGACCACCA GCGAGCTGTC CGCCAAGGTG
CCGCCGTTCA ATGCCCAACG CATGCTGACC GACGTCGGCG CGGCGACGCC CGCCGCCGCC
GAAGACGCGC AGAATCCCGA CGCCGTCGAG CCCGACGCCG AGGTGTCGTT CGTCACCCGC
GATCTCGGTC CGATTCTGCC GAAGGCCAAA GTCGCCGCCG TATTGGCGAT CGACGAGGTG
TTGATGCGGG TGCGCGACGC CTCGAGCTGG CGCGGTCAAA CCGGGGTTCG CTACACCATG
GCCAGCGCCA CCGGCGAAGC CGGCACGCCG CATTCCGACA TCAAGATGGC CTACGCCACC
GAGGGCAACG TCGCCGCCGA TCCCTATGCC GGATTCGAGA CCCGCGTGGT GCCGGAGAAC
GTGACGCTGC TGCCGAAGAC CAAGGACCAG GCGACCGGCG GCAACCCGAC CAACGAGCGG
ATCCACATCG TCAAGAAGAA CGACAGCATT TCCACCATCC TGCGCGACCA GGGCGCGACG
CCCGAGGAAA CCCGCGCGAT CGCCGCCACG CTCGGCTCCC GCGGCCGCGA CGGCGGGCTC
AAAGAAGGCC AGAAGATCCG CATCCTGATG GCGCCGGCCG GCCCCGGCCA ACGGCTGCAG
CCCTATCGCG TCGTGGTGGC GAGCGACTCC ACTGTCGAAG CGGTGGCGGC GCTGTCCGAC
CTCGGCAAAT ACGTCGCGGT CGACGTGCAG AGCATGAACA CCGTCGCCGA GGTGCCCGAC
AGCAGCGACG ACGACGAGGA CGACGGCACC GGCGTGCGGC TGTATCAAAG CATCTACGAG
ACCGCGCTGC GCAACAAGGT GCCGGCCGGC GTGATCGAGG ACATGGTCCG GATCTATTCG
TACGACGTCG ATTTCCAGCG CCGGGTGCAG GCCGGCGATT CGTTCGAGGT GTTCTTTGCC
GGCGAGGACG AAGGCTCCAA CGCCACCGAG AAAAACGACG TGCTGTATGC CGCGCTCACC
GTCGGCGGCG AGACCAAGAA ATATTATCGC TTCCAGACCC CCGACGATTC GGTGGTGGAT
TTCTACGACG AGAGCGGCAA GAGCGCGAAG AAGTTCCTGG TGCGCAAGCC GGTCAACCAG
GCGATCATGC GCTCGGGCTT CGGCGGCCGG CGGCATCCGA TCCTCGGCTA CGTCAAGATG
CACACCGGCG TCGATTGGTC GACGCCCTAC GGCACGCCGA TCTTTGCCTC CGGCAACGGC
ATCGTCGAGA AGGTCGGCTG GGAAGGCGGC TACGGCAAAT ACGTCCGGCT CAAGCACAAC
AACGGCTACG AGACCGCCTA CGGCCATATG TCGGCGTTCG CCAAGGGGCT GGAGCCCGGC
AAACGCGTGC GCCAGGGCCA GGTGATCGGC TTCGTCGGCT CCACCGGACT GTCGACCGGC
GCCCACGTGC ATTACGAAAT TTTGGTCAAC GGCCGCTTCG TCGACCCGAT GCGGGTCAAG
CTGCCGCGCG GCCGCTCGCT GGAAGGTCCG CTGATGGCGA GCTTCGAGAA AGAACGCGAC
CGGCTGGATA CGATGATGAC CAGCCGCAAC GGCCGGCTGT CGGAAGATCT GTCGACGCCG
TCGCGCAACC AGAGCGCCTC GGCGCAGGGA CGTCCCGTCA CGCGGTAA
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| Protein sequence | MVGDGGLSHR TTRARSYGRE AGIIDLGHEP PLSVDGSEAA VIDRRRVSVQ WFSGTILTGL
CGAALIGGAV FASLDGEMTF AKVPERVEGA LRGAFGANDR NASLHKSDRL PPPSESAAAR
QVVRVSTVTR IGNRDVMRVR PFIRIAGNLA LTTSELSAKV PPFNAQRMLT DVGAATPAAA
EDAQNPDAVE PDAEVSFVTR DLGPILPKAK VAAVLAIDEV LMRVRDASSW RGQTGVRYTM
ASATGEAGTP HSDIKMAYAT EGNVAADPYA GFETRVVPEN VTLLPKTKDQ ATGGNPTNER
IHIVKKNDSI STILRDQGAT PEETRAIAAT LGSRGRDGGL KEGQKIRILM APAGPGQRLQ
PYRVVVASDS TVEAVAALSD LGKYVAVDVQ SMNTVAEVPD SSDDDEDDGT GVRLYQSIYE
TALRNKVPAG VIEDMVRIYS YDVDFQRRVQ AGDSFEVFFA GEDEGSNATE KNDVLYAALT
VGGETKKYYR FQTPDDSVVD FYDESGKSAK KFLVRKPVNQ AIMRSGFGGR RHPILGYVKM
HTGVDWSTPY GTPIFASGNG IVEKVGWEGG YGKYVRLKHN NGYETAYGHM SAFAKGLEPG
KRVRQGQVIG FVGSTGLSTG AHVHYEILVN GRFVDPMRVK LPRGRSLEGP LMASFEKERD
RLDTMMTSRN GRLSEDLSTP SRNQSASAQG RPVTR
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