Gene RPC_4267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4267 
Symbol 
ID3972920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4751937 
End bp4752788 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content67% 
IMG OID637927371 
Producthypothetical protein 
Protein accessionYP_534110 
Protein GI90425740 
COG category[S] Function unknown 
COG ID[COG3777] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.692302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CTCTCGATCT CGATCATCTG AAACAATGGA TCGGCCGTAG CGAGCAGGCC 
TCCGATGTGG TGACCGCGCA GCTGGTGAAG GGCTTGCGCG CCACGTTGTT TCTCGACATC
GGCGCGCCGG CCGCGGGCGA CGCGGCACCG TTCACGGTGC ATTGGTGCCT GGCGCAGCCG
GTGGCGGCGA TGGCCGAACT CGGCCCCGAC GGCCATCCGG CGCGCGGCGG GTTTCTGCCG
CCGGTGCCGC TGCCGCGACG GATGTGGGCC GGCGGCGAGT TGCAGTTTCT CGACACGTTG
CGGGTCGGCG ACGCGGTCAA CCGCACCTCC ACCATCACCG ACGTAACGCT GAAGCACGGC
TCCAGCGGGC CGTTGTGCTT CGTCGCGGTC GAGCATGTGA TCTCGACCGC GCGCGGCATC
GCTATTCGCG AACGCCAGGA CATCGTCTAT CGCGACGCGC CGAGCGGCGG TGCCGCGCCC
GCGGCCAAGC CCGCGGCGCC ACCGCCCGCG CAGCATCGCG AAATTCATGT CGCCGATCCG
GTGCTACTGT TTCGCTATTC GGCGCTGACC TTCAACGGCC ACCGCATCCA TTACGACCGC
GACTACGTCA CCAAAGTCGA ATTCTATCCG GGTCTGGTGT TTCACGGCCC GCTGCAGGCG
GCGCTATTGG TGAACTTCGC GGCGAAATTG CACGGCGGCG CCGAGCCAAA AAAGTTCAGC
TACCGCGGCG TGCAGCCGTT GTTCGACGGC GCCGAATTCA GCGTCAACGC CAACCCGACC
GACGCCGGCC TCGAGCTCTG GACCGCCAAC GCAGACGGCG CGCCGACCAT GAAGGCCAGC
GCGAGCTGGT GA
 
Protein sequence
MTDALDLDHL KQWIGRSEQA SDVVTAQLVK GLRATLFLDI GAPAAGDAAP FTVHWCLAQP 
VAAMAELGPD GHPARGGFLP PVPLPRRMWA GGELQFLDTL RVGDAVNRTS TITDVTLKHG
SSGPLCFVAV EHVISTARGI AIRERQDIVY RDAPSGGAAP AAKPAAPPPA QHREIHVADP
VLLFRYSALT FNGHRIHYDR DYVTKVEFYP GLVFHGPLQA ALLVNFAAKL HGGAEPKKFS
YRGVQPLFDG AEFSVNANPT DAGLELWTAN ADGAPTMKAS ASW