| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4247 |
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| Symbol | |
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| ID | 3971589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4726967 |
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| End bp | 4729735 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927350 |
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| Product | CheA signal transduction histidine kinases |
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| Protein accession | YP_534090 |
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| Protein GI | 90425720 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.63903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACT TGTTGCGCGA GTTTTTGACG GAGACGAATG AGAGCCTGGA CACGGTTGAC
AACCAACTGG TCAGGTTCGA GCAGGACCCC AACAACGCCA AGATTTTGGA CAACATTTTC
CGGCTGGTCC ACACCATCAA GGGGACCTGC GGGTTTTTGG GTCTGCCGCG GTTGGAAGCT
TTGGCGCACG CCGCCGAGAC CCTGATGGGC AAATTCCGCG ACGGCATGCC GGTGACCGGC
GAGGCGGTGA CGCTGATCCT TTTGACCATC GACCGGATTA AAGAGATTCT AGGCGGGCTG
GAGGCCACCG AGGCCGAGCC TGAGGGCGTC GACCAGGATT TGATCGGCGA GTTGGAAGTG
TTGTCGCAAG CGCCGATGGC GGCGCCGGTG GTCGAAGTCG TCCCCGAAGT GGAGGCCGCG
CCGGTGGCGG CGGTCGCCGA GGGCACGCTG GTGCCGCAGA TTCTGGAGCG CGCGCTGCGC
CCCGGCGAAG TCTCGCTCGA CGAATTGGAG CGGGCGTTTC GCGAGACCGA AGTCGCGGTG
GAGATTGCGC AGCCGGTCGA AGCCAAAGCT GCCGAAGCCG ACCACGCCGA GCATAAGCCC
GCGGACGCCG CGCCGGTGGC CGCCGAGGCC AAATCCGACG CCAAATCGGA CGCCAAGCCA
GGCAAGCCCG TGACCAAGAA GAAGACCGCC GTGGAATTGG ATATGCCGCT GCACGATTCC
GACAAGATCG CCAACCAGTC GATCCGGGTC AATGTCGACA CCCTCGAGCA CCTGATGACC
ATGGTGTCCG AGCTGGTCTT GACCCGCAAT CAGCTCCTGG AGATCAGCCG CCGCCACGAG
GACACCGAGT TCAAGGTGCC GTTGCAGCGG CTCTCCACCG TCACCGCCGA ACTGCAGGAC
GGCGTGATGA AGACCCGCAT GCAGCCGATC GGCAACGCCT GGCAGAAGCT GCCGCGCATC
GTGCGCGATC TGGCCTCCGA ACTCGGCAAG CAGATCGAAC TGGAGATGCA CGGCGCCGAC
ACCGAGCTCG ACCGCCAGGT GCTCGACCTG ATCAAGGATC CGTTGACGCA TATGGTGCGC
AACTCCGCCG ATCACGGCCT CGAGACCCCG GCCGATCGCG CCGCCGCCGG CAAGCCCGAG
CAGGGCACGA TTCGCTTGTC CGCCTATCAC GAGGGCGGCC ACATCGTGCT GTCGATCGCC
GACAATGGTC GCGGCCTCGA CACCGCGCGG ATCAAGGCCA AGGTGATCGC CAACGGGCTG
GCCTCCGAAG CCGACGTCGA GAAGATGTCG GAGAGCCAGA TCCACAAATA CATCTTCGCG
CCGGGGTTCT CCACCGCGGC TGCGGTCACC AGCGTGTCCG GCCGCGGCGT CGGCATGGAC
GTGGTGCGCA CCAATATCGA TCAGATCGGC GGCACCATCG ACATCAAGTC GGTGGCCGGC
GAAGGCTCCA GCGTCACTAT CAAGATCCCG CTGACCTTGG CGATCGTCTC GGCGCTGATT
GTTGAGTCCG CCGGCAACCG CTTCGCCATC CCGCAATTGG CGGTGGTCGA GCTGGTGCGG
GCGCACGCCA ATTCCGAGCA CAAGATCGAG CGCATCAAGG ACACGCCCGT CCTGCGCTTG
CGCAACAAGC TGCTGCCGTT GATGCATCTG CGCCACCTGT TGCGGATCGA CGACGGCAAG
GTCACCGAGC CGGAGAACGG CTTCATCGTG GTGACCCAGG TCGGCAACCA GACCTTCGGC
ATCGTCGTCG ACGGCGTGTT CCACACCGAA GAAATCGTCG TCAAGCCGAT GTCGACCAAG
CTGCGGCACA TCGGCATGTT CTCCGGCAAC ACCATCCTGG GCGACGGCGC GGTGATCATG
ATCGTCGATC CCAACGGCAT CGCGCAGGCG CTCGGCACTT CGGTCGCAGC CCAGCACGAC
ATCGCCGAAG ACAACGCCGC GATCCGCGCC TCCTCGGCCG ATCAGTTGAC CTCGCTGCTG
GTGTTCCGCG CCGGTTCCGC GCAGCCCAAG GCGGTGCCGC TGTCGCTGGT GACGCGGCTC
GAAGAGATCG CCGCCGACAA GATCGAGTTC TCCAACGGCC GCCACATGGT GCAGTACCGC
GATCAGCTGA TGCCGCTGGT GACGATGGAC GGCGTCAGCG TCAAGACCTC CGGGGCGCAG
CCGATCCTGG TGTTCGCCGA CGAGGACCGC GCGATGGGCC TCGTGGTCGA CGAGATCGTC
GACATCGTCG AAGAACATCT GCAGATCGAG GTCGGCTCCA GCCACGAGGG CATTTTGGGC
TCCGCGGTGA TCAAGGGCGC CGCCACCGAA GTGATCGACG TCGGCCACTT CCTGCCGATG
GCGTTCGCCG ACTGGTTCAA GCGCAAGGAA ATGCGGCCCT CCACCACCGC ACAGTCGATC
CTGCTGGTCG ACGACAGTGC GTTCTTCCGC AACATGCTGG GCCCGGTGCT GAAGGCCGCG
GGCTACAAGG TGCGGCTCGC CACCAACGCC CAGGAAGGCT TGGGCGTGCT GCGCTCCGGC
CAGGAATTCG ACGCCATCCT CACCGACATC GAGATGCCGG ACATGAACGG CTTCGAATTC
GCCGAGACCA TCCGCGCCGA CGCCAAATTG GCGCAGACCC CGATCATCGC GCTGAGCTCA
ATGATCTCGC CGGCGGCGAT CGAGCGTGGC CGGCAGGCCG GCTTCCACGA CTACGTCGCC
AAGTTCGACC GGCCGGGCCT GATCGCCGCG CTGAAAGAAC AGACCACCCA TCTGAACCAG
GCGGCGTGA
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| Protein sequence | MDDLLREFLT ETNESLDTVD NQLVRFEQDP NNAKILDNIF RLVHTIKGTC GFLGLPRLEA
LAHAAETLMG KFRDGMPVTG EAVTLILLTI DRIKEILGGL EATEAEPEGV DQDLIGELEV
LSQAPMAAPV VEVVPEVEAA PVAAVAEGTL VPQILERALR PGEVSLDELE RAFRETEVAV
EIAQPVEAKA AEADHAEHKP ADAAPVAAEA KSDAKSDAKP GKPVTKKKTA VELDMPLHDS
DKIANQSIRV NVDTLEHLMT MVSELVLTRN QLLEISRRHE DTEFKVPLQR LSTVTAELQD
GVMKTRMQPI GNAWQKLPRI VRDLASELGK QIELEMHGAD TELDRQVLDL IKDPLTHMVR
NSADHGLETP ADRAAAGKPE QGTIRLSAYH EGGHIVLSIA DNGRGLDTAR IKAKVIANGL
ASEADVEKMS ESQIHKYIFA PGFSTAAAVT SVSGRGVGMD VVRTNIDQIG GTIDIKSVAG
EGSSVTIKIP LTLAIVSALI VESAGNRFAI PQLAVVELVR AHANSEHKIE RIKDTPVLRL
RNKLLPLMHL RHLLRIDDGK VTEPENGFIV VTQVGNQTFG IVVDGVFHTE EIVVKPMSTK
LRHIGMFSGN TILGDGAVIM IVDPNGIAQA LGTSVAAQHD IAEDNAAIRA SSADQLTSLL
VFRAGSAQPK AVPLSLVTRL EEIAADKIEF SNGRHMVQYR DQLMPLVTMD GVSVKTSGAQ
PILVFADEDR AMGLVVDEIV DIVEEHLQIE VGSSHEGILG SAVIKGAATE VIDVGHFLPM
AFADWFKRKE MRPSTTAQSI LLVDDSAFFR NMLGPVLKAA GYKVRLATNA QEGLGVLRSG
QEFDAILTDI EMPDMNGFEF AETIRADAKL AQTPIIALSS MISPAAIERG RQAGFHDYVA
KFDRPGLIAA LKEQTTHLNQ AA
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