| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4243 |
|---|
| Symbol | |
|---|
| ID | 3971585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4723909 |
|---|
| End bp | 4724781 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637927346 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_534086 |
|---|
| Protein GI | 90425716 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.115502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCGG CCGATTACGA TTTTCTCTGC AAGCTGTTGA AGGATCGCTC CGGCCTCGAC
CTGTCGGCCG ACAAGCGCTA CCTGGTCGAA AGCCGCCTGC TGCCGCTGGC GCGGCGCCAC
GATCTGCCGG GCATCAGCGA ACTGGTGCAA AAAATCCGCG CCGGCGCCGA GGCGATCACC
GCCGAAGTGG TCGAGGCGAT GACCACCAAC GAGACGTTCT TCTTCCGCGA CAAGTTGCCG
TTCGACCATC TGCGCGAGGA GATCATTCCG GCGTTGCTGC AGGCCCGTGC CGGCCGCCGT
GCCTTGCGGA TCTGGTGCGC CGCCGGCTCG ACCGGGCAGG AGCCGTATTC GATCGCGATG
GTGCTGAAGG AGATGGCCGC ACAGCTGTCC GGCTGGCGGG TCGAGATCGT CGCTACCGAT
CTCAACGAGG CGGTGCTGGA GAAGGCCAAA TCCGGCCTGT ACAGCCAGTT CGAGGTGCAG
CGCGGACTGC CGATTCAGCT GTTGGTGAAG TACTTCAAGC AGACCGGCGA ACTCTGGCAG
CTCAACCCCG AGATCCGCGC CATGGTGCAG CATCGTAAGC TCAATCTGTT GCAGGACTTC
TCAAGTCTCG GCTCGTTCGA CGTGGTGTTC TGCCGCAACG TGCTGATCTA TTTCGATCAG
GACACCAAGA TCTCGATTTT CAACCGCATC GCCAAAGTGC TGGAAGCCGA CGGCTATTTG
GCGCTCGGCG CCGCCGAAAC CGTGGTCGGG TTGACCGACG CGTTCAAGCC GCATCCGGAT
CGTCGCGGCA TCTATCGGCC GAACGCCGAC CGCCGTGCGC CGTCGATCGT GCCGGCGATG
CAGCCCGCGC TGAAACTGGT CGCGGCAAGA TAG
|
|---|
| Protein sequence | MSPADYDFLC KLLKDRSGLD LSADKRYLVE SRLLPLARRH DLPGISELVQ KIRAGAEAIT
AEVVEAMTTN ETFFFRDKLP FDHLREEIIP ALLQARAGRR ALRIWCAAGS TGQEPYSIAM
VLKEMAAQLS GWRVEIVATD LNEAVLEKAK SGLYSQFEVQ RGLPIQLLVK YFKQTGELWQ
LNPEIRAMVQ HRKLNLLQDF SSLGSFDVVF CRNVLIYFDQ DTKISIFNRI AKVLEADGYL
ALGAAETVVG LTDAFKPHPD RRGIYRPNAD RRAPSIVPAM QPALKLVAAR
|
|---|
| |