| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4228 |
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| Symbol | |
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| ID | 3972951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4704662 |
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| End bp | 4705210 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927331 |
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| Product | sigma-24 (FecI-like) |
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| Protein accession | YP_534071 |
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| Protein GI | 90425701 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACGC CGGCTGAGTT GGTCTGGCTG CTTGCCGCTG TGTCCAAGGG CGACGAACTC
GCCTTCGAGC GGCTCTATGC GGCGACGCGC GCGAAACTGT TCGGCGTGGT GCTGCGTATC
TTGCGGCGTC AGGACCTCGC CGAAGAGGTC ATTCAGGAAG CCTACGTCAA GATCTGGAAA
AGCGCCGGGC AGTTCAACCC CGCCGTCGCT TCCCCCATCA CCTGGATGGT CTCGATCGCG
CGCAACCGGG CGATCGACGT GGTGCGCAAG CGCGGCGAGG TTTCGATCGA GGAAGAGCCG
GCCGCGCTCG ACGTGGCCGC CGACACGCCG GATCCGTTGG CGCGCCGGGA GATGACCGAA
GAATTGAAGC GGCTGTTGGA ATGCGTCGGC CGGCTCGAGC CGGATCGGCA GAAGCTGGTG
CTGCTGGCCT ATTACAACGG CTGGAGCAGG GACCAATTGG CGGCGAAGTT CGAGACGCCG
GTGAACACGG TGAAGACCTG GCTGCGCCGC AGCCTGTTGG ACGTGCGCGA GTGTCTGGGA
TTGGCATGA
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| Protein sequence | MLTPAELVWL LAAVSKGDEL AFERLYAATR AKLFGVVLRI LRRQDLAEEV IQEAYVKIWK
SAGQFNPAVA SPITWMVSIA RNRAIDVVRK RGEVSIEEEP AALDVAADTP DPLARREMTE
ELKRLLECVG RLEPDRQKLV LLAYYNGWSR DQLAAKFETP VNTVKTWLRR SLLDVRECLG
LA
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