| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4220 |
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| Symbol | |
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| ID | 3972942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4694971 |
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| End bp | 4695525 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927322 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_534063 |
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| Protein GI | 90425693 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGATCA TCCCGACACC GCTGGCCGGC TGCGTGCTGA TCGAGCCCGA CATCATCGCG
GACGAGCGCG GTTACTTCCT GCGGACGTTC TGCGCGTCGA CCTTCGAGGC CCACGGCCTC
AACCCGGCGA TCGACCAGGC CAGCCTATCC TACAACCGCG CGCAATACAC CCTGCGCGGC
CTGCATTTTC AGGCACAGCC GCACATGGAA GACAAGCTGG TGCGGGTGGT GAATGGCGCG
ATCTTCGACG TCGCGGTGGA TATCCGCACC GATTCGAAGA CTTTCGCCAG ATGGTACGCC
GCCGAGCTCA CCGAGCAGAA CCAGCGCGCG CTGTATATTC CGCGAGGGTT TGCCCACGGC
TTTCTGACGC TGACCGACGA GACCACGGTA GCCTATCAGA TCGCGCAGCC TTACGTGGCG
AGCCTGGCGC GCGGCGTGAA CTTCAGCGAT CCGCAGATCG CCGTGCGCTG GCCGCACCCG
CCTTCTGTCA TCAGCCAGCG CGATCGCGAT CTGCCCGCGC TGGCGGCGAT CGATCCGACC
TCCGTCTCGC AGTGA
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| Protein sequence | MKIIPTPLAG CVLIEPDIIA DERGYFLRTF CASTFEAHGL NPAIDQASLS YNRAQYTLRG
LHFQAQPHME DKLVRVVNGA IFDVAVDIRT DSKTFARWYA AELTEQNQRA LYIPRGFAHG
FLTLTDETTV AYQIAQPYVA SLARGVNFSD PQIAVRWPHP PSVISQRDRD LPALAAIDPT
SVSQ
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