| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4207 |
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| Symbol | |
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| ID | 3972662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4678392 |
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| End bp | 4678946 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927309 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_534050 |
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| Protein GI | 90425680 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.653218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGATTG ATGAGTTGAA CATCCCGGGC GTAGTCGTGC TGACGCCGAA ACGCTTTGCC
GACGACCGCG GCTGGTTCAT GGAAACCTAC AGCCATCCGG CGCTGCAAGC CCTCGGCATC
GAGCTCGATT TCGTCCAGGA CAACCACTCG CTGTCGCTGC ACACCGGCAC GTTGCGCGGC
CTGCATTTCC AGACCCCGCC GCACGCCCAG GCCAAGCTGG TGCGCTGCGT GCGCGGCCGC
ATTCTCGACG TCGCGGTCGA CGTTCGGGCC AATTCGCCGA CCTACGGCCA ATACGCCTCG
GCCGAATTGT CGGCCGCCGA CGCCCGGCAA ATCTTCATCC CGGTCGGCTT CGCGCACGGC
TTCGTCACGC TCGAACCGGA TACCGAGGTG GTCTACAAGG TCAGCGACAT CTACGCTCCG
CAATGCGACG GCGGCATCCG CTGGAACGAC CCCACCATCG CCTTCCCTTG GAACATCGAG
CACGGCCCGT TCCTCTCGCC AAAGGACGAA AAGCTGCCGC TGCTGGCGGA TTTTGTCAGT
CCGTTCCGAA TGTGA
|
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| Protein sequence | MTIDELNIPG VVVLTPKRFA DDRGWFMETY SHPALQALGI ELDFVQDNHS LSLHTGTLRG
LHFQTPPHAQ AKLVRCVRGR ILDVAVDVRA NSPTYGQYAS AELSAADARQ IFIPVGFAHG
FVTLEPDTEV VYKVSDIYAP QCDGGIRWND PTIAFPWNIE HGPFLSPKDE KLPLLADFVS
PFRM
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