| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4197 |
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| Symbol | |
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| ID | 3972554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4664626 |
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| End bp | 4667166 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637927299 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_534040 |
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| Protein GI | 90425670 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTAACC AGTTTGCAAG CATCGAAGAG TTCTTCGATG AGAGCTATTA CGCGTTTTCC
GGCGAAGCCA AAAAGAACGG AATCCGTCCA ATCGATCACT ATCTCCAGTT TGGGGAACAA
CTCGGTGCTG CTCCGTCGAC CAGATTCGAC CCCAAATACT ATTTGAAACA ATATCCCGAT
CTTGGTGGCT GGCAAGGGGG ACTGCTCAAC CACTATCTGC AGTACGGCAG AGCGGAGGGC
CGACAGGGCG TCGCAATGAC CCCGAGCATC GCGTGCCCGA CGGAAAAGAT CGATCCCGGC
CGCGCGACCA TCCTGCTGGC CGTTCACGAC GCGTCACGGT CCGGAGCGCC GATTCTGGCA
TGGAATCTGA TCAACGAGTT GCGCAAGCAA CATAACGTCG TGGTTCTGCT CAAAAGCGGC
GGCCCGATCG AACCGGCGCT CCGGGAGGCG GCGACTGAAC TCGTCACCAT CCCTGCCGAA
TTTCCCTATG GGTCCGGCGA GGACGCTCTC TTCGCTCAGA AGCTGACCGA AACCTACTCG
CCGCTCTACG CCATCGCCAA CAGCGTCGCG ACGCGCGAAC TGGCCATTCT GCTTGAGGCC
GCAGGCGTCC CGGTGATCGC ATTGGTGCAC GAATTTTCCA GCTACTTTCA ACCGATCGGG
ATTCTCAACC CGCTGTACGT TTCGGCGTCG AAACTCGTCT TTCCGGCGCC GATTGTCGCC
GACGCCAGTG TGCAGGACTA TCCAGGTCTC AAGCCCCGAC ATTTGGATAT CCTGCCTCAA
GGCCCGTCGA AAGTTCCCAG CTTTCAGCAC CCTACCGGCG GCGCCGAGCG TCGCAGTTCC
GTGCAACGAC TGGAGGACCT GGCGCTTGAA GATACCGCCG TGATTCTCGG GACTGGGCGA
ATCGAATACC GAAAAGGCGT CGATGCGTTC ATCGCAGCGG CCTCGCAGGT CCAACGCAGC
GCGACACGAA AATTCAAATT CGTCTGGATC GGCCATCTGC ATCCGTCCGA CGCCAGTTAT
TTCGGTTTTC TGCAAGAGCA GATCAAGCGA AGCGGCCTTG AGCAACACGT TCTGTTCGTC
GATGAGGTCG ATGAACTTGA ACCGTTCTAC AGCAAGGCCG ATGTGTTTTT TCTCAGTTCG
CGGCTGGACC CGCTTCCAAA CGTTGCCATC GACGCGTCGT TGAGGAAGAT TCCAGTGGTC
TGCTTCAAGA ACGCCAGCGG CTTCGCCGAG TTGCTCGAGT GCAGCGACAC TGCCAAAGAA
CTGGTCGTCC CCTACCTCGA CAGTTCGGCG GCCGGCCGCA TGATTTGCGA CCTGCTGGCA
GATGCCCGCC TGTTGACACG ACTTGGCGAG GATATTCAGG CTGTTGCCAA CGCCACCTTC
GACATGGGCC AATATGCCCG CAAGCTCGAC CAACTCGGAC GCACCTGTGC CGCCGACATT
GAGCAGATGG CGCTCGACCA GGCGACGATC CTAGAGTCCG GGATCTTCAA CGCCAGCCTT
CGTTTCGGAA GTTGCGCGGA AAAGTTCACG CCCGATCAGG CCGTCAACGA ATACCTCAAC
GCGTCGCGAC TTTGCCGGCC GCTGCACCGG GGCAAGGCCG GAATGCTGAT TCGCCGGCCG
GTCGAAGGCT TTCATCCTTT GATTTACGCC GCCGAGAATC CCGAGGTCGA TCGCCAAGGC
ATCGATCCAC TGGCGCATTT TCTTCGCAAT GGGCGACCGG AAGGGCGTTG GACCCATCGT
GTCATCCGCC CCGAACCGCG CCGCGAAAGC AATGCAGCCC GGCCGCGGAT CGCCATCCAC
GGCCATTTTT ACTACCCGGA TCTGCTTGAG AGCTTCCTAA AGTTGATCGC CGCGAATGCC
AGTTCGGTCG ATCTGTTCTT GACCACCAGC GGCCCGGAGC AGGCCGCGCA GATCCGAAAG
TCGCTGCGGG CCTTCGGCAT TCAAAATGCC GATGTCTGGT CGGTGCCGAA TCGCGGGCGC
GATATCGGGC CCTTTCTCAA GGAAATGCCC GACAAGCTCG GCTCCTACGA CATCGTCGGC
CATTTTCACG GCAAGCGAAG CAAGCACGTC GACTCCACGG TCGGCGACCA ATGGCGGGAT
TTTGCCTGGC AGCATCTGAT CGGCGACGCG TTTCCGATGA TCGACGTTAT CGCCGATGCA
TTCGCGGAGG ATGCCAAGCT CGGGCTGGTT TTTGCAGAGG ATCCCTATCT GAACGGATGG
GACGAGAACC GCGACCTGGC CGAACGGCTG GCGCAGCGCA TGAAGATCGA GGCCCCGCTT
CCCGAACACT TCGATTTTCC GATCGGGACG ATGTTCTGGG CGCGTGTCGC TGCGTTGCAG
CCGTTGTTTC AGTTGAACCT GGATTGGAAT GACTACCCGC ACGAGCCGCT GCCGATCGAC
GGCACGATTT TGCACGCGCT CGAGCGCATC GTTCCGTTCG CCGTCCAGAA ATCCGGCTTC
GAATACGCCA CAACCTATGT GCGTTCCAGC ATGCGCGACG ATGGCCTGGC CTTTATTCGC
CGCCCCGGCT TGCAAAGGTG A
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| Protein sequence | MSNQFASIEE FFDESYYAFS GEAKKNGIRP IDHYLQFGEQ LGAAPSTRFD PKYYLKQYPD
LGGWQGGLLN HYLQYGRAEG RQGVAMTPSI ACPTEKIDPG RATILLAVHD ASRSGAPILA
WNLINELRKQ HNVVVLLKSG GPIEPALREA ATELVTIPAE FPYGSGEDAL FAQKLTETYS
PLYAIANSVA TRELAILLEA AGVPVIALVH EFSSYFQPIG ILNPLYVSAS KLVFPAPIVA
DASVQDYPGL KPRHLDILPQ GPSKVPSFQH PTGGAERRSS VQRLEDLALE DTAVILGTGR
IEYRKGVDAF IAAASQVQRS ATRKFKFVWI GHLHPSDASY FGFLQEQIKR SGLEQHVLFV
DEVDELEPFY SKADVFFLSS RLDPLPNVAI DASLRKIPVV CFKNASGFAE LLECSDTAKE
LVVPYLDSSA AGRMICDLLA DARLLTRLGE DIQAVANATF DMGQYARKLD QLGRTCAADI
EQMALDQATI LESGIFNASL RFGSCAEKFT PDQAVNEYLN ASRLCRPLHR GKAGMLIRRP
VEGFHPLIYA AENPEVDRQG IDPLAHFLRN GRPEGRWTHR VIRPEPRRES NAARPRIAIH
GHFYYPDLLE SFLKLIAANA SSVDLFLTTS GPEQAAQIRK SLRAFGIQNA DVWSVPNRGR
DIGPFLKEMP DKLGSYDIVG HFHGKRSKHV DSTVGDQWRD FAWQHLIGDA FPMIDVIADA
FAEDAKLGLV FAEDPYLNGW DENRDLAERL AQRMKIEAPL PEHFDFPIGT MFWARVAALQ
PLFQLNLDWN DYPHEPLPID GTILHALERI VPFAVQKSGF EYATTYVRSS MRDDGLAFIR
RPGLQR
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