| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4181 |
|---|
| Symbol | |
|---|
| ID | 3972538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4646162 |
|---|
| End bp | 4646881 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637927284 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_534025 |
|---|
| Protein GI | 90425655 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTGC CGCCACCGGA CGAGGCCCCG GCCACGCGTT GGGCCGCGGA GGACTATCCC
GATTATGCCG CGGACGTGAA CAGCTCGATC GATTTTTCCG GGCTGCCGCA GTCGTTCTTC
ACGCGCGGCA AGGCCGAGAA GATCATCGAG AAGGTCCGCG CGCTGCAGGG CGCGTCACCC
GCAAGGCTGC TCGACATCGG CTGCGGACCG GGATTGATCC ACGCGTTTCT GCCGGCTGCC
GAGATCCAAC TGACCGGCGT CGACGTCAAT GCTGGCGCGA TCGCGGCCGC GCAGGCCCAG
CATCAAGCCA ACGCCTATCT GACCTATGAT GGCCGCGCCT TGCCGTTCGA GGATGCCAGC
TTCGACATCG CGGTCGCCAT CTGCGTGATC CACCATGTCC CGCCGGCGGA GTGGGGCGGG
TTCGTGCGCG AGGTGCGGCG GGTGTTGCGT CCTGGCGGCG TGATGGTGGT GTGTGAACAC
AATCCGCTCA ATCCGCTGAC CCGGCTTGCG GTGCATCGCT GCAAATTCGA CCACGATGCC
GTGCTGCTCA GGGCTGGTTC GATGGCGAAA TTGATGCGCG ATGCCGATTT CGAACCGGCG
CAGATCGAGT ACATCTTTTT CACACCGTTC GACGTCGCAA TCGTCAAGCG TCTTGAAAGA
GCGATTCGCT GGCTGCCGCT CGGCGCACAA TACGTCGCCA CAGCACGCAA GCCGGCCTGA
|
|---|
| Protein sequence | MALPPPDEAP ATRWAAEDYP DYAADVNSSI DFSGLPQSFF TRGKAEKIIE KVRALQGASP
ARLLDIGCGP GLIHAFLPAA EIQLTGVDVN AGAIAAAQAQ HQANAYLTYD GRALPFEDAS
FDIAVAICVI HHVPPAEWGG FVREVRRVLR PGGVMVVCEH NPLNPLTRLA VHRCKFDHDA
VLLRAGSMAK LMRDADFEPA QIEYIFFTPF DVAIVKRLER AIRWLPLGAQ YVATARKPA
|
|---|
| |