| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4179 |
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| Symbol | |
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| ID | 3972536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4643621 |
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| End bp | 4644937 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927282 |
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| Product | putative branched-chain amino acid ABC transport system substrate-binding protein |
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| Protein accession | YP_534023 |
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| Protein GI | 90425653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTC AACGAAAGAT CACCGGAGGA CACCACATGA CGATGAAATC CTTGTTGAGC
ACCGCGTCGC TGGCGCTCGT GATCGCGGGC TTCGGGGCCG GCGCGCAGGC GCAGATCGCG
ATCGGCCACC TCGCCGATTA TTCCGGCGGC ACGTCGGACG TCGGCACGCC CTACGGCCAG
GGCGTCGCCG ACACTTTTGC CTGGGTCAAC AAGCACGGTG GCGTCGGCGG CAAGCAGCTC
AATGTCGACA CCAACGATTA CGGCTATCAG GTGCCGCGAG CGATCGCGCT GTACAAGAAA
TGGTCCGGCA GCGACAAGGT CGCGGCGATC ATGGGGTGGG GCACCGCCGA CACCGAGGCG
CTGACCGGCT TCCTCGCCAA CGACAAGATC CCCGATTTGT CCGGCTCTTA CGCCGCGGCG
CTGACCGATC CGCTCGGCGC CAGCGGCAAG GCCAAGCCGG CGCCGTATAA TTTCTTCTAC
GGTCCCTCCT ATTCCGATGC GCTGCGCGCC GAATTGACCT GGGCCGCGGA AGACTGGAAA
GCCAAGGGCA AATCCGGCAA GCCGAAATTC GTCCACATGG GCGCCAACCA TCCCTACCCC
AACGCGCCGA AGGCCGCCGG CGAAGCGATG GCGACCGAAC TCGGCTTCGA CGTGCTGCCG
CCGCTGGTGT TCGCGCTCGC CCCGGGCGAT TACAGCGCGC AATGCCTCAG CTTGAAGAGC
GCCGGCGCCA ACTACGCCTA TCTCGGCAAC ACCGCGGCCT CGAATATTTC GGTGATGAAG
GCCTGCAAGA CCGCCGGCGT CGACGTGCAG TTCATGAGCA ACGTCTGGGG CATGGACGAG
AACGCCGCCA AGACCGCCGG CGACGCCGCC GACGGCGTGA TCTTCCCGCT GCGCACCGCG
GTCGGCTGGG GCGGCGACGC GCCGGGCATG AAGACCGTGC AGGAGATCTC CAAGATCTCC
GATCCCACCG GCAACGTCTA TCGCCCGGTG CATTACATCG CCGGGGTCTG CAGCGCGCTT
TACATGAAGG AAGCGCTGGA TTGGGCCGCG GCGAACGGCG GCGCCACCGG CGAGAACGTC
GCCAAGGGCT TCTACCAAAA GAAGGACTGG GTGCCGGCCG GGATGGAAGG CGTCTGCAAT
CCCTCGACCT GGACCGACAA GGACCACCGC GGCACGCTGA CCGTCAACCT GTATCGCTCG
CGGGTCTCCG GCCCGACCGA CGGCGACCTC AACGACCTGA TCAAGAAGGG CACCGTGAAG
CTCGAGAAGG TCAAGACCAT CGAGCTGCCG CGTAAGGCGG AATGGGCGGG GTGGTAG
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| Protein sequence | MKRQRKITGG HHMTMKSLLS TASLALVIAG FGAGAQAQIA IGHLADYSGG TSDVGTPYGQ
GVADTFAWVN KHGGVGGKQL NVDTNDYGYQ VPRAIALYKK WSGSDKVAAI MGWGTADTEA
LTGFLANDKI PDLSGSYAAA LTDPLGASGK AKPAPYNFFY GPSYSDALRA ELTWAAEDWK
AKGKSGKPKF VHMGANHPYP NAPKAAGEAM ATELGFDVLP PLVFALAPGD YSAQCLSLKS
AGANYAYLGN TAASNISVMK ACKTAGVDVQ FMSNVWGMDE NAAKTAGDAA DGVIFPLRTA
VGWGGDAPGM KTVQEISKIS DPTGNVYRPV HYIAGVCSAL YMKEALDWAA ANGGATGENV
AKGFYQKKDW VPAGMEGVCN PSTWTDKDHR GTLTVNLYRS RVSGPTDGDL NDLIKKGTVK
LEKVKTIELP RKAEWAGW
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