Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4171 |
Symbol | |
ID | 3972314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 4635527 |
End bp | 4636222 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637927274 |
Product | ABC transporter related |
Protein accession | YP_534015 |
Protein GI | 90425645 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGAGG TCAGGGATCT GCACGCCTAT TACGGCAAGA GCCACATCCT GCAGGGCGTC GACATGCAGA TCGCCGCCGG CGAGGTGGTC AGCCTGCTCG GCCGCAACGG CGTCGGCCGC TCCACCACGG TGAAGGCGAT CATGGGCGAA GTGCCGCCGG TCGGCAGCAT TCGCTTCAAG GGCGCCGATA TCGCAGGCTT GCCGAGCTAC AAGATCGCGC ATCGCGGGCT CGGCTATGTG CCCGAGCATC GCGACATCTT CCCGGGGCTC ACGGTGCGGC AGAACCTGAT GCTCGGCATC AAGGACCCGC GCCATCCCGG CAAGTGGCGG CTCGACGACA TGCTGGAGAT GTTTTCGAAC CTGAAGGCGC GCGCCGACAC CGCCGCGGGC GTGTTGTCCG GCGGCGAGAA GCAGATGCTG ACGATCTGCC GCACCCTGAT GGGCAACCCC GACCTGGTGA TGATCGACGA GCCGACCGAG GGGCTGGCGC CGATCATCGT GCAGCAGGTC GGCGACCTGA TCGCCGAGAT CGCCCGGCGC GGCGTCGCCA TCCTCTTGGT CGAGCAGAAG CTGTCGATCG CGCTGCGGAT CTCGCACCGC GTCTATGTGA TGGGCCACGG CCGCATCGTG TTCGAAGGCT CGCCGGCCGA CCTCAAGGCC AACGACGCCG TGCGCAAGGA ATGGCTGGAG GTCTGA
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Protein sequence | MLEVRDLHAY YGKSHILQGV DMQIAAGEVV SLLGRNGVGR STTVKAIMGE VPPVGSIRFK GADIAGLPSY KIAHRGLGYV PEHRDIFPGL TVRQNLMLGI KDPRHPGKWR LDDMLEMFSN LKARADTAAG VLSGGEKQML TICRTLMGNP DLVMIDEPTE GLAPIIVQQV GDLIAEIARR GVAILLVEQK LSIALRISHR VYVMGHGRIV FEGSPADLKA NDAVRKEWLE V
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