Gene RPC_4171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4171 
Symbol 
ID3972314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4635527 
End bp4636222 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID637927274 
ProductABC transporter related 
Protein accessionYP_534015 
Protein GI90425645 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAGG TCAGGGATCT GCACGCCTAT TACGGCAAGA GCCACATCCT GCAGGGCGTC 
GACATGCAGA TCGCCGCCGG CGAGGTGGTC AGCCTGCTCG GCCGCAACGG CGTCGGCCGC
TCCACCACGG TGAAGGCGAT CATGGGCGAA GTGCCGCCGG TCGGCAGCAT TCGCTTCAAG
GGCGCCGATA TCGCAGGCTT GCCGAGCTAC AAGATCGCGC ATCGCGGGCT CGGCTATGTG
CCCGAGCATC GCGACATCTT CCCGGGGCTC ACGGTGCGGC AGAACCTGAT GCTCGGCATC
AAGGACCCGC GCCATCCCGG CAAGTGGCGG CTCGACGACA TGCTGGAGAT GTTTTCGAAC
CTGAAGGCGC GCGCCGACAC CGCCGCGGGC GTGTTGTCCG GCGGCGAGAA GCAGATGCTG
ACGATCTGCC GCACCCTGAT GGGCAACCCC GACCTGGTGA TGATCGACGA GCCGACCGAG
GGGCTGGCGC CGATCATCGT GCAGCAGGTC GGCGACCTGA TCGCCGAGAT CGCCCGGCGC
GGCGTCGCCA TCCTCTTGGT CGAGCAGAAG CTGTCGATCG CGCTGCGGAT CTCGCACCGC
GTCTATGTGA TGGGCCACGG CCGCATCGTG TTCGAAGGCT CGCCGGCCGA CCTCAAGGCC
AACGACGCCG TGCGCAAGGA ATGGCTGGAG GTCTGA
 
Protein sequence
MLEVRDLHAY YGKSHILQGV DMQIAAGEVV SLLGRNGVGR STTVKAIMGE VPPVGSIRFK 
GADIAGLPSY KIAHRGLGYV PEHRDIFPGL TVRQNLMLGI KDPRHPGKWR LDDMLEMFSN
LKARADTAAG VLSGGEKQML TICRTLMGNP DLVMIDEPTE GLAPIIVQQV GDLIAEIARR
GVAILLVEQK LSIALRISHR VYVMGHGRIV FEGSPADLKA NDAVRKEWLE V