| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4166 |
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| Symbol | |
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| ID | 3972309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4629530 |
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| End bp | 4630477 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637927269 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_534010 |
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| Protein GI | 90425640 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTG GCAAGCGAGT ATTGGTCACC GGCGGCGCCG GCTTCTTGGG ATCGCATCTG
TGCGAGCGGT TGCTCGGGCT CGGCCATCAG GTGATCTGCG TCGACAATTT CTTCACCGGG
CAGCGCCGCA ACATCAAACA TCTGCTCGCC AACCCCGACT TCGAGGTGAT CCGCCACGAC
GTCACCTTTC CGCTCTATAT CGAGGTCGAC CAGATCTACA ATCTGGCCTG TCCGGCTTCG
CCGATCCACT ACCAGCACGA CCCGGTGCAG ACCACCAAGA CCAGCGTGCA CGGCGCCATC
AACATGCTCG GGCTGGCGAA GCGGCTGCGC TGCAAGATCT TCCAGGCCTC GACCTCGGAG
GTCTATGGCG ATCCGGAAAT CCATCCGCAG GTCGAGAGCT ATTGGGGCCG GGTCAATCCG
ATCGGGTTGC GGTCGTGCTA CGACGAGGGC AAGCGCTGCG CCGAGACGCT GTTCTTCGAC
TATCACCGCC AGCACGCCAC CGCGATCAAG GTGGCGCGGA TCTTCAACAC CTACGGCCCC
AGGATGTACG TCAACGACGG CCGCGTGGTG TCGAATTTCG TGGTGCAGGC GCTGCGCGGC
GAGGACATCA CGCTGTATGG CGACGGCGCG CAGACCCGGT CGTTCTGCTA CGTCGACGAC
CTTATCGAGG GCATCATCGG CCTGATGGAG ACCGCCGACG ACATCACCGG CCCGGTCAAT
CTCGGCAATC CGGTGGAATT CACCATCCGC GAATTGGCCG AGCAGGTGGT CGAATTGACC
GGCTCGCGCT CCAAGCTGGT GTTCGCACCA TTGCCGTCCG ACGATCCGCG GCAGCGCAAG
CCGGACATCT CGCTGGCGAC GCGATTGCTG GACTGGGAGC CAAAGGTGCA GCTGCGCGAG
GGGCTCGGCA AGACCATCGA GCACTTCAGG GGCGTGCTTG CCGAGTAA
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| Protein sequence | MKLGKRVLVT GGAGFLGSHL CERLLGLGHQ VICVDNFFTG QRRNIKHLLA NPDFEVIRHD
VTFPLYIEVD QIYNLACPAS PIHYQHDPVQ TTKTSVHGAI NMLGLAKRLR CKIFQASTSE
VYGDPEIHPQ VESYWGRVNP IGLRSCYDEG KRCAETLFFD YHRQHATAIK VARIFNTYGP
RMYVNDGRVV SNFVVQALRG EDITLYGDGA QTRSFCYVDD LIEGIIGLME TADDITGPVN
LGNPVEFTIR ELAEQVVELT GSRSKLVFAP LPSDDPRQRK PDISLATRLL DWEPKVQLRE
GLGKTIEHFR GVLAE
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