| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4137 |
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| Symbol | |
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| ID | 3970330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4597003 |
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| End bp | 4600164 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927241 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_533982 |
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| Protein GI | 90425612 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA CTCCCGACAA ACCCAACAAG CCGATCAAGA CCCCGAAATC CAAGGCGCAT
CGGCCCGACG TGAAGCCGAT CGGGCCGGCG CTGGCGGAAC TGCTCAATCC CGCGATCAAT
CGCGGCGACG CCGGCATGGG TTCCGGCACC GGGCTACAGC CGCCGCCGGA CAATTCCCGC
GACCGCCGCA CCGGCGGCGA GGCCGCGATC CATCGCGCGC GAGCGTCGAC GACACAAGTG
CCCCCACCCA ACCCTCCCCC GCAAGCGGGA GAGGGCTCCG CGCGGCGAGC GCCGCACACC
GTCGCTCGCG TTGAATCCGT GGAGGGGCAG CCATCGCCCC CTCTCCCGCT TGCGGGGGAG
GGCCGGGGTG GGGGCGCCAC GCGCACGACC GCGCCCGGCT TCGCCGAAGC CCCGCAATCC
GACTTCGCCA CGCCGAATTA CGGCACCACA GCCACCATCC CGACGCTCGA TCCGGAACTC
GCCAAGCAGC TCGGCTTCAC CACCGAGGAA GAGGATGAAG CCGCCCTCGC CCGCCCGCCG
CGCAACAAGA TGGAAGCGCT CGGCGTGCAG GCCACCGCCG ACGCGCTGGA GAACCTGATC
CGCGACGGCC GCCCGGAATT CAAGGGCGAG GACGGCAACG TCAAGCTATG GACGCCGCAT
CGCCCGCCGC GCCCGGAGAA GACCGAAGGC GGCGTGCGCT TCGTCATCAA ATCCGAATAT
GAACCGAAGG GCGACCAGCC CACCGCGATC AAGGAACTGG TCGAAGGCAT TTCGCGCAAC
GATCGCACCC AGGTGCTGCT CGGCGTCACC GGCTCCGGCA AGACCTACAC CATGGCCAAG
GTGATCGAGG CGACGCAGCG CCCGGCGATC ATTCTGGCGC CGAACAAGAC GCTGGCGGCG
CAGCTCTATG GCGAGTTCAA GAGTTTTTTC CCCGACAACG CCGTCGAGTA CTTTGTCAGC
TATTACGATT ACTACCAGCC CGAGGCCTAC GTCCCCCGCA CCGACACCTA CATCGAAAAA
GATTCATCGA TCAACGAACA GATCGACCGG ATGCGCCACG CCGCCACCCG CGCGCTGCTG
GAGCGCGACG ACGTCATCAT CGTCGCCTCG GTGAGCTGCA TCTACGGTAT CGGCTCGGTC
GAGACCTATA CCGCGATGAC CTTTGCGCTG AAGAAGGGCG AGCGGATCGA CCAGCGCGCG
CTGATCGCCG ATCTGGTGGC GCTGCAATAC AAGCGCACCC AGGCCGATTT TACTCGCGGC
ACCTTCCGGG TGCGCGGTGA CGTCATCGAC ATCTTCCCGG CGCACTATGA AGACCGCGCC
TGGCGCGTCA ATCTGTTCGG CGACACCGTC GAGACCATCG AGGAATTCGA CCCGCTCACC
GGCCACAAGC AGGACGAGCT GGAATTCATC AAGATCTACG CCAATTCGCA TTACGTCACG
CCGCGGCCGA CGCTGTTGCA GGCGATCAAA TCGATCAAGG CCGAGTTGAA ATGGCGGCTC
GATCAGCTCA ACGATCAGGG CCGATTGCTG GAGGCGCAGC GGCTCGAGCA GCGCACCACC
TTCGACATCG AGATGATGGA GGCCACCGGA AGCTGCGCCG GCATCGAGAA CTACTCGCGC
TATCTCACCG GCCGCCGCCC CGGCGAGCCG CCGCCGACGC TGTTCGAATA CGTCCCCGAC
AACGCGCTGG TGTTCGCCGA CGAGAGCCAC GTCACCGTGC CGCAGATCGG CGGCATGTTC
AAAGGCGATT TTCGACGCAA GGCGACGCTG GCCGAGTATG GATTCCGCTT GCCGTCCTGC
ATGGACAACC GGCCGCTGCG GTTCGAGGAA TGGGACATGA TGCGCCCGCA ATCGGTCGCG
GTGTCGGCGA CGCCGTCGGC GTGGGAGCTG AACGAGAGCG GCGGCGTGTT CGTCGAACAG
GTCATCCGCC CGACCGGGCT GATCGACCCG CCGGTCAACA TCCGTCCGGC CCGCACCCAG
GTCGACGACC TGGTCGGCGA GGTCCGCGCC ACCGCGCAGG CCGGCTATCG CTCGCTGATC
ACCGTCTTGA CCAAGCGGAT GGCCGAAGAC CTCACCGAAT ATCTGCACGA ACAGGGCATT
CGGGTGCGCT ATATGCACAG CGACATCGAC ACCATCGAAC GCATCGAGAT CATCCGCGAT
TTACGCTTGG GGGCTTTTGA CGCCCTGGTC GGCATCAACC TGTTGCGCGA AGGACTCGAC
ATTCCGGAAT GCGCGCTGGT GGCGATCCTC GACGCCGACA AGGAAGGCTT TCTGCGCAGC
GAGACCTCCC TGATCCAGAC CATCGGCCGC GCCGCGCGCA ACGTCGACGG CAAGGTGATC
CTCTACGCCG ACCGCATCAC CGGATCGATG GAGCGCGCCA TCGCCGAGAC CGACCGCCGC
CGCGAGAAGC AGGTCGAGTA CAACACCGAA CACAACATCA CCCCGGAGAG CATCAAGAAA
TCGATCGGCG ACATTCTCAA CAGCGTCTAT GAGCGCGACC ACGTGCTGGT CGAAATCGGC
GGCGGCGGCC AAGGCGGCAG CTGGTCCGAC GACGTCGGCG CGATCGGGCA TAATTTCGAG
ACGGTGCTGG CCGATCTCGA AACCAGGATG CGCGAGGCCG CGGCCGACCT GAACTTCGAA
GAGGCCGCGC GGCTGCGCGA CGAGGTCAAG CGGCTGCGCG CCACCGAATT GGCGGTGGTC
GACGATCCCA CCGCCAAGCA ACGCACCGTG CAGGGCAAGG CGGGGTCCTA CGCCGGCGCC
AAGAAATACG GCGCTGCTGC CAACCTGCCG CAGCAATCCA AGGAACGCGG CGGCAACAAC
ACGCCGAAGG TGCGGGGGGC GACGGGCGCC GCCACGCAAC GCGACGGTTC TTCTCCCTCC
CCCCTTGCGG GGGAGGGTCG GGGTGGGGGG TCTAAAGCGG CAGCCTCTCG CATCCACAAG
CCCGATCTCG ACGAGATGGG TATCGCCAGC TGGCACGAGG TCATGCCGGA TCGCAAAGGC
CGCGCCAAGC CGCGCAAACC GACGCTCGAC GAGATGGGCC CCGGCACCGA GAGCAGGATT
TTTCAGCCGA AGACGTCGCG CGAATCCGGC CCGGAATTCG GCCCCTCGCC GCGCTCATCC
GGCGGCGCGC CGGGGCACAG GGGAGGATGG AAGAAGAGGT AG
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| Protein sequence | MAKTPDKPNK PIKTPKSKAH RPDVKPIGPA LAELLNPAIN RGDAGMGSGT GLQPPPDNSR
DRRTGGEAAI HRARASTTQV PPPNPPPQAG EGSARRAPHT VARVESVEGQ PSPPLPLAGE
GRGGGATRTT APGFAEAPQS DFATPNYGTT ATIPTLDPEL AKQLGFTTEE EDEAALARPP
RNKMEALGVQ ATADALENLI RDGRPEFKGE DGNVKLWTPH RPPRPEKTEG GVRFVIKSEY
EPKGDQPTAI KELVEGISRN DRTQVLLGVT GSGKTYTMAK VIEATQRPAI ILAPNKTLAA
QLYGEFKSFF PDNAVEYFVS YYDYYQPEAY VPRTDTYIEK DSSINEQIDR MRHAATRALL
ERDDVIIVAS VSCIYGIGSV ETYTAMTFAL KKGERIDQRA LIADLVALQY KRTQADFTRG
TFRVRGDVID IFPAHYEDRA WRVNLFGDTV ETIEEFDPLT GHKQDELEFI KIYANSHYVT
PRPTLLQAIK SIKAELKWRL DQLNDQGRLL EAQRLEQRTT FDIEMMEATG SCAGIENYSR
YLTGRRPGEP PPTLFEYVPD NALVFADESH VTVPQIGGMF KGDFRRKATL AEYGFRLPSC
MDNRPLRFEE WDMMRPQSVA VSATPSAWEL NESGGVFVEQ VIRPTGLIDP PVNIRPARTQ
VDDLVGEVRA TAQAGYRSLI TVLTKRMAED LTEYLHEQGI RVRYMHSDID TIERIEIIRD
LRLGAFDALV GINLLREGLD IPECALVAIL DADKEGFLRS ETSLIQTIGR AARNVDGKVI
LYADRITGSM ERAIAETDRR REKQVEYNTE HNITPESIKK SIGDILNSVY ERDHVLVEIG
GGGQGGSWSD DVGAIGHNFE TVLADLETRM REAAADLNFE EAARLRDEVK RLRATELAVV
DDPTAKQRTV QGKAGSYAGA KKYGAAANLP QQSKERGGNN TPKVRGATGA ATQRDGSSPS
PLAGEGRGGG SKAAASRIHK PDLDEMGIAS WHEVMPDRKG RAKPRKPTLD EMGPGTESRI
FQPKTSRESG PEFGPSPRSS GGAPGHRGGW KKR
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