Gene RPC_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4127 
Symbol 
ID3970320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4589065 
End bp4589940 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content70% 
IMG OID637927231 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_533972 
Protein GI90425602 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGATGGC AGCCGCTGAA AAAGACCATC GCCATGATCC GCTTCGTCGT CGTCGTCGCC 
GCATTCGTCG CGCTCACCCT GCTCCTGCTG CCGTTCCAAT TGCTGGCGAT GCGCTTCGAC
CTGCGTTTGC AGCGGATCAT TCCGCAGCTC TATCACCGCG CGCTGTGCCG ATTGATCGGC
GTCCGCATCC GCCAAGTCGG CCAACGCAGC GCCGACGCCC CGGCGCTGAT TCTCTCCAAT
CACGTCTCCT GGCTCGACAT CTGCGTGATC GGCGCGCTCG GCCCGGTGGT GTTCGTCTCC
AAGAGCGAAG TGGCGCGCTG GCCGGTGTTC GGCTGGCTGT CGCGGCTGCA GCGCACCGTG
TTCATCGACC GCCAGGCCCG CCATCGCACC GGCGCCGCCA CCCAGGAAAT CGGCGACCGG
CTGGTCGGCG GCGACGCCGT GGTGCTGTTC GCCGAAGGCA CCTCCAGCGA TGGCGTTCGC
ATCCTGCCGT TCCGCTCGGC CTTGATCGGC GCGGTGCATC ACGCGCTCGG CGCCTCGACC
CAGCACAACG CCATCACCGT GCAGCCGTTG TCGCTGGCCT ATGTCCGTTT CGCCGGATTG
CCGGTCGGCC GCGCGCTGCG CGAACGCGTC GCCTGGTACG GCGACGCCGA CCTGATGCCG
CATCTGATGG GCGTGCTGTC GGCCGGCGCG ATCGACGTCA CCGTCAGCTG GGGCGACGCG
GTCGCTCACG ATGTCTCCGC CGACCGCAAG GCGATCGCGC GCCAGGCCGA AGCCGAGGTG
CGGCGGATGA CCGGCGCAGC GTTGCGCGCG GCGCCGCCGG CGCTGCCGGC GCCCGCCACC
GAGAAATTGC CGCTGCCCTG GCCGCAGCCG GCCTGA
 
Protein sequence
MRWQPLKKTI AMIRFVVVVA AFVALTLLLL PFQLLAMRFD LRLQRIIPQL YHRALCRLIG 
VRIRQVGQRS ADAPALILSN HVSWLDICVI GALGPVVFVS KSEVARWPVF GWLSRLQRTV
FIDRQARHRT GAATQEIGDR LVGGDAVVLF AEGTSSDGVR ILPFRSALIG AVHHALGAST
QHNAITVQPL SLAYVRFAGL PVGRALRERV AWYGDADLMP HLMGVLSAGA IDVTVSWGDA
VAHDVSADRK AIARQAEAEV RRMTGAALRA APPALPAPAT EKLPLPWPQP A