| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4123 |
|---|
| Symbol | |
|---|
| ID | 3970316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 4584618 |
|---|
| End bp | 4585862 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637927227 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_533968 |
|---|
| Protein GI | 90425598 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.305787 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTTT TTCAGCGAAC CGGAATCCTT GCCGGGCTGC GCAGCGGAGC CTGGCTGACC
GGCGAACGGG TCCGCGGCTA CAGCCTGATT CTGCTCGGCC TTGGCGCCGC GGCGATCGTC
GGCTGGCTGG CGCTGTCGGA CGCCATGATC GACCGCAACG GCAAGCCGAT CGGCACCGAT
TTCTCCGACC CCTACGCCGC CGGCACCCTG GCGCTCGCCG GCAAGGCCGC CGATGCCTAC
GTCCCCGCGT TGCAGCACGA CGCCGAACGC GCGGTGTTCG GCGGCCGCGA CGTGCCGTTC
TATGGCTGGC ACTATCCGCC GTTCTTCTTC GCCGTGGCGA TGGCGGTGGC GGCGCTGCCC
TATGGCTGGG GATTGCTGCT CTGGCTGACC TCGAGCCTTG CGGCCTATCT GGCAATGATT
CGCATGGTGC TGCCGCGACC GGAGACGCTG TTGGTCGCGC TCGCCTTCCC CGCCGTGCTG
GTCAATATCG GCCACGGCCA GAACGGCTTC CTCACCGCCG CATTGCTCGG CGGTGCGTTG
CATTGGCTCG ACCGGCGACC CATTCTGGCC GGCGTGTTGA TCGGGCTGTT GGCCTACAAG
CCGCAATTCG GGTTGCTGAT CCCGCTGGCG CTGCTCGCAG GCGGGCGGTG GAAACCGATC
GGCGCCGCCG CGGCCACCGT CGCCGTGCTG TTCGCGCTGA GCGTGGCGGC GTTCGGCAGC
GGCATCTGGC AAGCCTTTGC CGAGTCCACC CGTTTCACCC AAGACGTGGT CCTCGAACAG
GGCAACACCG GCTGGGAGAA GATTCAATCG ATCTTCTCCG CAGCGCGCAA TTGGGGCGCG
ACGGTGCCCG TCGCCTATGC GTTGCAGCTG CTGCTGGCGC TGACCGTCGC GGCCAGCCTG
GCCTGGCTAT GGCGCAGCAC CGCGCAATTC GAACTCAAGG CTTCGGCGCT GGCGACGGCG
TGCCTGCTCG CCACCCCCTA CGTGCTGGAT TACGATCTCG TCGTGCTCGC GGTTTCGATC
GGCTTTTTCG TCCGCCACGG CTTCGCCCGC GGATTTCGCG ACTATGAGAT CAGCATGCTG
GCCGCCGCCT TCATCGTGCC GCTGCTGTCG CGCGGCATCG CTGCCGGCAC CGGGATTCCG
TTGGGCTTGC TGGCGCTGCT TTCGCTTTAC GCTTTCACCT TGCGACGCGC GGTGGCGGAT
TGCGCAACTC CAACCGCTGC AACGGCGCTG CCGGCGCATT CCTAA
|
|---|
| Protein sequence | MGFFQRTGIL AGLRSGAWLT GERVRGYSLI LLGLGAAAIV GWLALSDAMI DRNGKPIGTD
FSDPYAAGTL ALAGKAADAY VPALQHDAER AVFGGRDVPF YGWHYPPFFF AVAMAVAALP
YGWGLLLWLT SSLAAYLAMI RMVLPRPETL LVALAFPAVL VNIGHGQNGF LTAALLGGAL
HWLDRRPILA GVLIGLLAYK PQFGLLIPLA LLAGGRWKPI GAAAATVAVL FALSVAAFGS
GIWQAFAEST RFTQDVVLEQ GNTGWEKIQS IFSAARNWGA TVPVAYALQL LLALTVAASL
AWLWRSTAQF ELKASALATA CLLATPYVLD YDLVVLAVSI GFFVRHGFAR GFRDYEISML
AAAFIVPLLS RGIAAGTGIP LGLLALLSLY AFTLRRAVAD CATPTAATAL PAHS
|
|---|
| |