Gene RPC_4121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4121 
Symbol 
ID3970314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4582593 
End bp4583114 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content68% 
IMG OID637927225 
Producthypothetical protein 
Protein accessionYP_533966 
Protein GI90425596 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.677647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTT CAAGTTTGTT CGGTATCGCA GCGCTCTCGC TGGTTGCTTC GGTCGCCACC 
GCCAACGCGC AGCAGCGCCA GTTGCAGGTC GGCGTGCTCG AATGCTCCGG CGGCCAGAAT
GTCGGCTTCG TCGTCGGCTC GGTGACCGAT CTGCAGTGCG CCTTCCGCGC CGACGGTCGT
CGTCCCGAGC CCTACGTTGC TACCATTCAT CGGTTCGGCC TTGATCTCGG CTTCACCCAG
GACACCGGCT TTGCTTGGGC GGTCTACGCG CCGACCGATC GGATCGGCCG CGGCGATCTC
GCCGGCAGCT ACGGCGGCGT CGGCGCCAAT GCGTCGGTCG GCGTCGGCTT CGGCGGCAAC
CTGTTGGTTG GCGGCTCGTC CAATGCCTAC TCGCTGCAGC CGCTCAGCCT GCAGGGTCAG
ACCGGTCTGA ACGTCACCGC CGGCGTCGCC GATCTGCAGC TGCGCCCCGC CGATCTGCGC
GGCCCGCGCC GCGCCGTTCG GCATCATCGC CGTCATCGCT AA
 
Protein sequence
MRLSSLFGIA ALSLVASVAT ANAQQRQLQV GVLECSGGQN VGFVVGSVTD LQCAFRADGR 
RPEPYVATIH RFGLDLGFTQ DTGFAWAVYA PTDRIGRGDL AGSYGGVGAN ASVGVGFGGN
LLVGGSSNAY SLQPLSLQGQ TGLNVTAGVA DLQLRPADLR GPRRAVRHHR RHR