Gene RPC_4118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4118 
Symbol 
ID3973168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4579276 
End bp4579629 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content65% 
IMG OID637927222 
ProductXRE family transcriptional regulator 
Protein accessionYP_533963 
Protein GI90425593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.292967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTATC AAACATCATC GAAGCCGTTT ATGTTTGCGG CTTGTCTTCT GTCGCCTGCG 
TCGTCAAGTC GGATATTGCA CGTGATTACT TCATTTCAGA TGCGCGCCGC CCGCGCGCTG
TTGGGGATCG ACCAGCGCAC GCTGGCCGAA CTGGCCGGCG TCTCGGTGCC GACCATCCAA
CGCATGGAAG CCAGCGTCGG CAACGTTCGC GGCATCGTCG ATTCGCTGAC CCGGGTGGTC
GAGGCGCTGA ACCGCGCCGG GGTGGAATTG ATCGGCGAGC ACACCCGCAG CGACGACGGC
GGGCGCGGCG TGCGGCTGAA ACAGCCCGGG CCGCCGCCGC CGGTGGGGCC CTGA
 
Protein sequence
MMYQTSSKPF MFAACLLSPA SSSRILHVIT SFQMRAARAL LGIDQRTLAE LAGVSVPTIQ 
RMEASVGNVR GIVDSLTRVV EALNRAGVEL IGEHTRSDDG GRGVRLKQPG PPPPVGP