| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4112 |
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| Symbol | |
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| ID | 3973162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4573313 |
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| End bp | 4574506 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927216 |
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| Product | major facilitator transporter |
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| Protein accession | YP_533957 |
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| Protein GI | 90425587 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0806371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCCA CCGCGGCGGT GAAGGCCATG GGGCCGACCT ATCTGGTGCT CGGCGGCATC
AGCTTCTCGC ACTTCCTCAA CGACACCATG CAGTCGCTGA TTCCGTCGGT CTATCCGATC
CTGAAGGCGA ACTACGCGCT TGATTTCGGC CAGATCGGAT TGATCACGCT GACCTTCCAG
ATCACCGCCT CGCTGCTGCA GCCGGTGATC GGCCACATCA CCGACAAGAA AGCCCAGCCC
TATTCGCTGG CGATCGGCAT GGGCTCGACC CTGATCGGGC TGGCGCTGCT CAGCATCGCG
CATCACTACT TCGTTATTCT GCTGGCGGCG GCGCTGGTCG GGCTCGGCTC GGCGGTGTTC
CACCCGGAAT CGGCGCGGAT CGCCCGGCTG TCCTCCGGCG GGCGCTACGG CTTCGCGCAA
TCGGTGTTCC AGGTCGGCGG CAATTTCGGC CAGTCGATGG GGCCGCTGCT GGCGGCGCTG
ATCGTGGTGC CGTTCGGGCA GGGCAGTCTC GGTTGGTTCT GCCTGATCGC GGCTCTGGCG
ATCGTGGTGC TGTGGCGGAT CGGGAGCTGG TACAAGCCGC GGATCGTGCC GCGCAGCCGC
ACCGCGCCGC AACGGCATCC GGGGGCGCCG AGTTCGCGCC GCGTCGCGGT GGCGATCGGC
CTCTTGATCC TGCTGGTGTT CTCGAAGTTC ATCTACATGT CGAGCCTGAC CAGCTACTAC
ACCTTCTACC TGATGCAAAA ATTCGGCGTC AGCACGCAGA CCTCGCAGGT CTATCTGTTC
ATGTTCCTCG GCGCGACTGC GGTCGGCACC TTCTTCGGCG GCCCGATCGG CGACCGCATC
GGCCGGCGCT ACGTGATCTG GTTCTCGATC CTCGGCGTGC TGCCGTTCAC GCTGTTGTTG
CCCTATGCCG ACCTGATGTG GACCGCGGTG CTCAGCATCG TGATCGGGTT CATCCTGTCC
TCGGCGATGC CGGCGATCCT GGTCTATGCC CAGGAATTGA TGCCGCATCG CTTCGGCATG
ATCTCCGGGC TGTTCTTCGG CTTCTCGTTC GGCGCCGGCG GCATCGGCGC CGCGATGCTG
GGCCAGGTCG CCGACCACAA GGGCATCGAG TTCGTCTATC AGATCTGCGC CTTCCTGCCG
GCGATCGGGC TGCTCGCGAT GTTCCTGCCG AAGATGCCGC GCCACGGCCA CTAA
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| Protein sequence | MPPTAAVKAM GPTYLVLGGI SFSHFLNDTM QSLIPSVYPI LKANYALDFG QIGLITLTFQ
ITASLLQPVI GHITDKKAQP YSLAIGMGST LIGLALLSIA HHYFVILLAA ALVGLGSAVF
HPESARIARL SSGGRYGFAQ SVFQVGGNFG QSMGPLLAAL IVVPFGQGSL GWFCLIAALA
IVVLWRIGSW YKPRIVPRSR TAPQRHPGAP SSRRVAVAIG LLILLVFSKF IYMSSLTSYY
TFYLMQKFGV STQTSQVYLF MFLGATAVGT FFGGPIGDRI GRRYVIWFSI LGVLPFTLLL
PYADLMWTAV LSIVIGFILS SAMPAILVYA QELMPHRFGM ISGLFFGFSF GAGGIGAAML
GQVADHKGIE FVYQICAFLP AIGLLAMFLP KMPRHGH
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