Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4100 |
Symbol | |
ID | 3973189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 4556373 |
End bp | 4558052 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637927204 |
Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
Protein accession | YP_533945 |
Protein GI | 90425575 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCT GGCAACGCAA TTCCGACGCC GATAGTGCTG CGGCGCAACT CGAGGCGATC GGGCGATCGC AGGGCGTCAT CGAGTTCGGC ATGGACGGCA GCATCCTCAC GGCCAACCGG AATTTTCTCG ACGTGCTGGG CTACACGCTG GCGGAAATTC AGGGCAAGAA TCACAGCCTG TTCGTCGATC CGGCCGAGCG CGGCAGCGCC GCGTATCGCG GGTTCTGGGC GGCGTTGCAG CGCGGCGAAT TCCAGGCGGC GGAGTACAAG CGGATCGGCA AGGCCGGCAG GGAAGTCTGG ATTCAGGCCT CCTACAATCC GATCCTCGGC CGCGACGGCA AGCCGTTTCG AATCGTCAAA TTCGCCACCG ACATCACCGC GCGGAAACTC CGCAGCATGG AAGACGCCGG CAAGATCGCC GCGATCCAGC GCGCGCAAGC CGTGGTCGAA TTCAAGCTCG ACGGCACCAT CATCACCGCC AACGACAATT TCTTGAAGGC GATGGGCTAC ACGCTCGACG AAATCGCCGG CAAAAATCAC AGCATCTTCG TCGAGTCTGC GACCCGCGAC GGCGCGGCGT ATCGCGAGTT TTGGGCGGCG CTGAACCGCG GCGAATATCA GGCCGCCGAA TACAAGCGGA TCGGCAAGGC CGGCCGCGAG GTCTGGATTC TTGCGACCTA CAATCCGATC ATCGACGAGA CCGGCAAGCC GATCAAAGTC GTCAAATTCG CCACCGACGT CACCGCGCAA AGGCTCGGCA CCGCCAATCT CGCCGGTCAA GTCGAAGCGA TCGGCAAGTC GCAAGCGGTG ATCGAATTCG GCATGGACGG CACTATCCTC ACGGCCAACG ACAATTTTCT GAACGCGATG GGCTACACGC TGTCCGAGAT CAAGGGCCGC CACCACAGCA TCTTCGTGGA GCCGGCCGAG CGCGACAGCC CGGCCTACGG CGCGTTCTGG GCCGGGCTCA ACCGCGGCGA ATTCCAAGCC GCCGAATACA AGCGGATCGG CAAGCACGGC CGCGAGGTCT GGATCCAGGC GTCCTACAAT CCGATCCTCG ATCTCAACGG CAAGCCGTTC AAGGTCGTCA AATACGCCAC CGACACCACC GCGCAGGTGA TCGCCCGGCT GAAAAGCGAC CGGGTCCGCG CCATGATGGA GTCGGTCGCC GCGGGGGCCG AGGAATTGAA CGCCTCGGTG CGCGAGATTT CCGAGGCGAT GACCAAATCG CGCAACACCG CGATGTCGGC CGTCAGCAAG GTGGAATCGG CGGACGAACA GGCGCAGCGC CTCAGCGTCG CCGCGCAGGC GATGGGCGGC ATCGTCGACC TGATCGGCAA CATCACCGGT CAGATCAATC TGTTGGCGCT CAACGCCACG ATCGAATCCG CGCGCGCCGG CGAAGCCGGC CGCGGCTTCG CGGTGGTGGC GTCCGAGGTG AAGAGCCTCG CCAACCAGGC CAAGCAAGCC ACCGACAGGA TCGGTAGCGA GATCGCCGGC CTGAACGGCA TTTCCGGCGA TGTGATCAGC GCCCTGCTTG CGATCAAGAC GGAAATCCAG AACGTCAGCG AATACGTCAC CGCCACCGCG GCGGCGGTCG AGGAGCAGAG CACGGTGACC AGCGAGATGT CGTCCAGCAT GCAGCGCGCC GCCGCCGAAG CCGCCAGCAT CGGGCGCTAA
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Protein sequence | MSFWQRNSDA DSAAAQLEAI GRSQGVIEFG MDGSILTANR NFLDVLGYTL AEIQGKNHSL FVDPAERGSA AYRGFWAALQ RGEFQAAEYK RIGKAGREVW IQASYNPILG RDGKPFRIVK FATDITARKL RSMEDAGKIA AIQRAQAVVE FKLDGTIITA NDNFLKAMGY TLDEIAGKNH SIFVESATRD GAAYREFWAA LNRGEYQAAE YKRIGKAGRE VWILATYNPI IDETGKPIKV VKFATDVTAQ RLGTANLAGQ VEAIGKSQAV IEFGMDGTIL TANDNFLNAM GYTLSEIKGR HHSIFVEPAE RDSPAYGAFW AGLNRGEFQA AEYKRIGKHG REVWIQASYN PILDLNGKPF KVVKYATDTT AQVIARLKSD RVRAMMESVA AGAEELNASV REISEAMTKS RNTAMSAVSK VESADEQAQR LSVAAQAMGG IVDLIGNITG QINLLALNAT IESARAGEAG RGFAVVASEV KSLANQAKQA TDRIGSEIAG LNGISGDVIS ALLAIKTEIQ NVSEYVTATA AAVEEQSTVT SEMSSSMQRA AAEAASIGR
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