Gene RPC_4091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4091 
Symbol 
ID3973180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4545239 
End bp4545724 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content65% 
IMG OID637927195 
ProductMarR family transcriptional regulator 
Protein accessionYP_533936 
Protein GI90425566 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.294504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCAA GAAAAAATGT GCAAAATACA CATAATAGCG AACGGCTCCG TGTGCTGCAC 
GGCGCGCTGC TGGACATCGT CAGCGCCATG AACCAGCCGC ATCGCGACGA GGCGATGATC
CGGACGGCGG GGATTCCGCT CGACCGCGCG CTGTTTCCGT TGCTGGTCTT GATCGAACGG
TTCGGACCGA TTGGGGTCGT CGACTTGGCC GATCGGGTCG GGCGCGACTA CACCACGGTC
AGCCGCCAGG TCGCCAAGCT GGAAAGCCTT GAGCTGGTGC AGCGGCGGGA TAACGCCGCG
GATCGCCGGG TGCGCGAGGC GATCGTCACC GCGAAGGGCA AGGCGATGAC CGATCTGGTG
GACGGCGCGC GGGAGCGCAT CGCGCGCGGC ATTTTCGCGA GCTGGGAGCC CCGTGAGTTC
GACGAACTGG TGCGGCTGAT GCGGAAATTC GCCGACGCGG TGTCGCGCGA TCCGCCGGCC
GAATGA
 
Protein sequence
MPSRKNVQNT HNSERLRVLH GALLDIVSAM NQPHRDEAMI RTAGIPLDRA LFPLLVLIER 
FGPIGVVDLA DRVGRDYTTV SRQVAKLESL ELVQRRDNAA DRRVREAIVT AKGKAMTDLV
DGARERIARG IFASWEPREF DELVRLMRKF ADAVSRDPPA E