| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4088 |
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| Symbol | |
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| ID | 3973177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4541203 |
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| End bp | 4542801 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927192 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_533933 |
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| Protein GI | 90425563 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0493854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGA CCATACAGTT TTGCGGCGCG ACCAGGACCG TGACCGGCTC CTGCTATCTG
TTGAAGACAT CGGCCGGCAG TTTCCTGGTC GACTGCGGGT TGTTTCAGGG TCCCAAGACG
CTGAAGGAAT TGAACTACCG CGCATTCCCG TTTCGCGCCG CGGCGATCGA TGCGGTGCTG
TTGACCCACG CCCATATCGA TCATTCCGGG CTGCTGCCGA AACTGGTCCG CGAGGGCTTC
AAAGGTCCGA TCCTCGCCAC CCGCGGCAGC CGCGACCTGT GCTCCTACAT GCTACCCGAC
GCCGGCAGCA TCCAGGAATC CGAAGTGTTG GCGCTGAACC GCCGCAACGC CGCGCGCGGC
CGCGGCGAGG TCGAGCCGAT CTACACCCAG GCCGACGCGG TGGCGTCGCT CGCCGGGTTC
CGGCCGGTCG ACTACGAGAG CTGGGTCGAG GTCATTCCGG GCGTCCGCGC GCGGTTCTGG
AACGCCGGCC ATCTGCTCGG TTCGGCGTCG ATCGAAATCG AATGCGCCGG CGAAGGCGCG
CGAGGCGCCC CGCTGCGGCT GTTGGCCTCC GGCGACATCG GCCCCGACGC CAAGCTGCTG
CAGCCCGATC CGGAGGCCCC CGCCGGGTTC GACTATGTGC TGTGCGAATC CACCTATGGC
GATCGCGAGC GGCCGCCGAT CACGCCGGAG CAGCGCCGCG TCAGACTCGC CGAAGAAGTC
CGCGCCGCCG CCGAGCGGCG CGGCGCGCTG TTGATTCCAG CGTTTGCGGT GGAGCGCACC
CAGGAGCTGA TCGTCGATCT GATTGAGCTG ATGGAGCAGG GCGAGGTGCC GACCGCGCCG
GTGTTTCTGG ATTCGCCCTT GGCGATCCGC GCCACCGAAG TGTTCCGCAA ACATGCCGCG
GATCTCGACG GCGGCGTCGA TGTCGATCGG CTGCTGAATT CGGCGCAGCT GCGCTTCACC
GAAACCGTCG ATGAGAGCAA GGCGATCGCC AAGCTGAACG GCTTCCACAT CATCATCGCC
GCCAGCGGCA TGTGCGACGC CGGCCGCATC CGCCATCATC TGAAGCGCTG GCTGTGCCGG
CGCAACGGCA CCGTGCTGCT GGTCGGTTTT CAGGCTCACG GCACGCTGGG GCGGTTTCTC
GCCGAGGGCG CCAGCGCGGT GCGGATCCAG GGCGAGGAGA TCAAGGTCGC GGCGAACATC
CGCCAGATCG ACGATTACTC CGGCCATGCC GACGCCGGCG AATTGACGCG CTGGATCGCC
GCCCGGCGGC CGATCGGACG CGGGCTGTTT CTGCTGCACG GCGAGGAGGC CGCGATCTCG
GCCTTGCAGG GGCGGGTGGC GGAGACCTTG GTGCCGGCGG CGAAACTGTT CGCGCCGCTG
CTCGACGATA TCTACGATCT CAGCCCAGCG GTGCCGACGG TGATGGACGG CGCGCATCGC
CGCCGGCTCG CGCCGGAAGC CGTGGTGCAG CTCGATTGGC ACAACGAGAT GTCAAAACTG
ATACTCGATA TCAGCGCGCA GCTCGATGCC GCGGCCGACG ATCGCGCCCG CGGTGTGATC
ATCCGCCGGC TGCGCCGGGC GTTGGACAAT TCCGGCTGA
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| Protein sequence | MSVTIQFCGA TRTVTGSCYL LKTSAGSFLV DCGLFQGPKT LKELNYRAFP FRAAAIDAVL
LTHAHIDHSG LLPKLVREGF KGPILATRGS RDLCSYMLPD AGSIQESEVL ALNRRNAARG
RGEVEPIYTQ ADAVASLAGF RPVDYESWVE VIPGVRARFW NAGHLLGSAS IEIECAGEGA
RGAPLRLLAS GDIGPDAKLL QPDPEAPAGF DYVLCESTYG DRERPPITPE QRRVRLAEEV
RAAAERRGAL LIPAFAVERT QELIVDLIEL MEQGEVPTAP VFLDSPLAIR ATEVFRKHAA
DLDGGVDVDR LLNSAQLRFT ETVDESKAIA KLNGFHIIIA ASGMCDAGRI RHHLKRWLCR
RNGTVLLVGF QAHGTLGRFL AEGASAVRIQ GEEIKVAANI RQIDDYSGHA DAGELTRWIA
ARRPIGRGLF LLHGEEAAIS ALQGRVAETL VPAAKLFAPL LDDIYDLSPA VPTVMDGAHR
RRLAPEAVVQ LDWHNEMSKL ILDISAQLDA AADDRARGVI IRRLRRALDN SG
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