| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4077 |
|---|
| Symbol | |
|---|
| ID | 3973358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4530332 |
|---|
| End bp | 4531312 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637927181 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_533922 |
|---|
| Protein GI | 90425552 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
|---|
| TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.763811 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTCT ATACCGACGT CGCCGCCGAG GAGCTGGCGG AGTTTTTGCG CGGCTACGAC
ATCGGCGAGC TGTTGTCCTA CAAGGGCATC GCCGAAGGCG TCGAGAACTC CAACTATCTG
CTGCACACCT CGAAGGGCTC GTTCATCCTG ACGCTGTACG AAAAGCGCGT CGCCAGCGAG
GACCTGCCGT ATTTCCTGAC GCTGATGAGC CATCTGGCCG AGCGCGGCAT CCGTTGCCCG
CAGCCGGAGA AGAACCGCGG CGGCGCGGTG TTCGGCACCC TGATGGGGCG GCCGGCGGCG
ATCATCAATT TCCTCGAAGG GGTGTGGCCG CGCCGGCCCA ACGTCGCGCA ATGCGCCGCG
GTCGGCGAGG GGCTCGCCAG GCTGCATCTG GCCGGACAGG ATTTTCCGCT GCGCCGCGCC
AATCCATTGT CAGTGGGTGG ATGGCGGGCG CTGTTCGAAC AGTCCGCCGC CGGCGCCGAC
CCGTTGCAGC ACGGGCTGCA CGCGCTGCTG CACGCCGAAC TGGACTATCT CGAACACGCC
TGGCCGAAGC AGCTGCCGGA CGGCGTGATC CATGCCGATC TGTTTCCCGA CAACGCCTTC
TTCCTCGGCG ACACGCTGTC CGGCATCATC GACTTTCCGT TCGCCTGCAA CGACATCCTG
GCCTACGACG TGGCGATCTG CCTGAACGCC TGGTGCTTCG AGCCGGATCA TTCCTTCAAC
GTCACCAAGG CGCGCGCCTT TCTCGGCGGC TACGGTCGCG AGCGGCCGCT GACCACTTCA
GAAGAAGACG CGCTGCCGCT GTTGGCGCGC GGCGCGGCGT TGCGCTTTTT GCTGACGCGG
CTGGTGGATT CGCTGAACGT GCCGGCCGGC GCCTTGGTGC GGCCGAAGGA TCCGCTGGAA
TACGCCCGCA AGCTGCGCTT CCACCAGAGC GTCGATAGCA TCCGCGACTA CGGCGTCACC
GCCTCGGGGG TGGTGGCGTG A
|
|---|
| Protein sequence | MAVYTDVAAE ELAEFLRGYD IGELLSYKGI AEGVENSNYL LHTSKGSFIL TLYEKRVASE
DLPYFLTLMS HLAERGIRCP QPEKNRGGAV FGTLMGRPAA IINFLEGVWP RRPNVAQCAA
VGEGLARLHL AGQDFPLRRA NPLSVGGWRA LFEQSAAGAD PLQHGLHALL HAELDYLEHA
WPKQLPDGVI HADLFPDNAF FLGDTLSGII DFPFACNDIL AYDVAICLNA WCFEPDHSFN
VTKARAFLGG YGRERPLTTS EEDALPLLAR GAALRFLLTR LVDSLNVPAG ALVRPKDPLE
YARKLRFHQS VDSIRDYGVT ASGVVA
|
|---|
| |