| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4072 |
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| Symbol | |
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| ID | 3973353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4523426 |
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| End bp | 4525240 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927176 |
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| Product | cyclic beta-1,2-glucan ABC transporter |
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| Protein accession | YP_533917 |
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| Protein GI | 90425547 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01192] glucan exporter ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATGC TTCGTCTCTA CACCCGGGTG CTGCAACTGC TCGGCGGAGA AGCCCGGCTC
GGCTGGATCC TGGCGTTCGC CAATCTGTTG CTGGCCGGAG CGCAATTCGC CGAGCCTGTG
CTGTTTGGCC GCATCGTCGA CGTACTGTCC GGCAACCTCT CGACCGGCGC GCTGCAAACC
TCGGTCGCCT CGCCATGGCC GTTGCTCGGC GCCTGGGTCG CCTTCGGCCT GTTCACCATC
CTGTGCAGTG CGGCGGTGGC GCTGCACGCG GACCGGCTCG CGCATCGCCA GCGCCAGGCG
ATTTTGACCA GCTATTTCGA ACATATCATG CAGCTGCCCT TGACCTATCA CACCGGCACC
CATTCCGGCC GGCTGATGAA GGTGATGCTG CAGGGCACCG ACGCGCTGTG GCGGCTGTGG
CTCGGCTTCT TTCGCGAGCA TTTCGCCGCG ATCCTGTCGC TGGTCGTGCT GCTGCCGCTG
GCGCTGTATA TCAACTGGCG GCTGGCGATC CTGTTGTTCA TCCTGTGCGT GGTGTTCACC
GTGCTGACCA CGCTGGTGGT GCACAAGACC TACAGCATGC AGGGCGAGGT CGAAGAGCAG
TACAGCGATC TCTCGGCGCG AGCCTCCGAC GCCCTCGGCA ACGTGGCATT GGTGCAGAGC
TTCGTGCGGA TCGACGCCGA AGTGCAGGGG CTGCGCTTCG TCGCCGACCG GCTGCTGGCA
CTGCAGATGC CGGTGCTATC CTGGTGGGCG CTGGTTACCG TGATCACGCG GGCCTCCACC
ACCATCACCG TGCTGGCGAT CTTCACCGTC GGCATCGCGC TGCACGAGCA GGGCCTCACC
AGCGTCGGCG AGATCGTGAT GTTCGTGTCG TTCGCCACGC TGCTGATCCA GAAGCTCGAA
CAAGTGGTGT CCTTCATCAA CAGCGTGTTC ATGGAGGCGC CGCGACTGCA GGAATTCTTC
AACGTGCTGG ACGCCGTGCC GGCGGTGCGC GACCGCCCCG ATGCGGTCGA TCCCGAGCGG
CTGCAGGGCC TGGTCGAATT CAAGGACGTG TCGTTCTCCT ATGACGGCAA GCGGCCGGCG
GTCGCCGACC TGTCGTTCAC CGCGCGGCCC GGCGAGACCA TCGCGCTGGT CGGCGCCACC
GGCGCCGGCA AATCCACCGC GATCGCGCTG CTGCATCGCG CCTTCGATCC GCAGTCCGGC
GTGATCAGGA TCGATGGCCT GGACGTCCGC GACCTGACGC TGGCCGGGCT GCGGCGCAAT
ATCGGCGTGG TGTTCCAGGA GGCCTTGCTG TTCAACCGCT CGATCGCCGA CAATCTGCGG
GTCGGCAAGC CGGACGCCAC CGAGGAGGAA ATGCGCACCG CCGCCAGCCG CGCCCAGGCA
CTCGACTTCA TCGAACGCAG CGAACAGAAA TTCGACACCA ACGCCGGCGA ACGCGGCCGC
ATGCTGTCCG GCGGCGAGCG GCAACGGCTG TCGATCGCCC GTGCGCTGTT GAAAGATCCG
CCGATCCTGA TTCTCGACGA AGCCACCTCC GCGCTCGACG CGGTGACCGA GGCCAAGGTC
AATCTGGCGC TCGACGAGGT GATGAAGGGC CGCACCACCT TCGTAATCGC GCATCGGCTC
TCGACCATTC GCCACGCCAC GCGCATCCTG GTGTTCGAAG CCGGGCGGGT GATCGAAAGC
GGAACTTTCG ATGAATTGCT GGCGCGCCAG GGCCATTTCG CCGCACTGGC GCGCGCCCAG
TTCATGGTGC AGGAGACCTC GCGTGCCAAC ATGGCTGCTC CGCTCGAACA TGCAGCGAGT
GCGAAGATCA GTTGA
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| Protein sequence | MSMLRLYTRV LQLLGGEARL GWILAFANLL LAGAQFAEPV LFGRIVDVLS GNLSTGALQT
SVASPWPLLG AWVAFGLFTI LCSAAVALHA DRLAHRQRQA ILTSYFEHIM QLPLTYHTGT
HSGRLMKVML QGTDALWRLW LGFFREHFAA ILSLVVLLPL ALYINWRLAI LLFILCVVFT
VLTTLVVHKT YSMQGEVEEQ YSDLSARASD ALGNVALVQS FVRIDAEVQG LRFVADRLLA
LQMPVLSWWA LVTVITRAST TITVLAIFTV GIALHEQGLT SVGEIVMFVS FATLLIQKLE
QVVSFINSVF MEAPRLQEFF NVLDAVPAVR DRPDAVDPER LQGLVEFKDV SFSYDGKRPA
VADLSFTARP GETIALVGAT GAGKSTAIAL LHRAFDPQSG VIRIDGLDVR DLTLAGLRRN
IGVVFQEALL FNRSIADNLR VGKPDATEEE MRTAASRAQA LDFIERSEQK FDTNAGERGR
MLSGGERQRL SIARALLKDP PILILDEATS ALDAVTEAKV NLALDEVMKG RTTFVIAHRL
STIRHATRIL VFEAGRVIES GTFDELLARQ GHFAALARAQ FMVQETSRAN MAAPLEHAAS
AKIS
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