Gene RPC_4063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4063 
Symbol 
ID3973344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4514026 
End bp4514493 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content69% 
IMG OID637927167 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_533908 
Protein GI90425538 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0138941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGCTGA TCGCCGCCGC CCTTGCGGTG ACGCGGTATA ACGTCGTGCA TGCGCTGTTG 
TATCTGTTGG CGATGCTGCT GGCGCTGGCG GCGTCGTTCT TTGCGCTGCG TGCTGCGTTC
GCCGCGGTGC TGCTGATCAT GGTCTATGCC GGCGCGATCA TCGTGCTGTT CGTGTTTGTG
GTGATGGCGG TCGGCACCTC GCCGGAGGCG ATCGCCCGCG AGCGCGCGAT GCTGAGGCGC
AGCTGGCCGA TGCCAGCGGC GATCAGCGTG CTGGTGGCGG CGCCGTTTCT GTTCGGGATC
GGCGAGCAGG CGCCCGGCAA CACCGCGCCG ATCGCAGCGC AAGCGGTCGG CCGCTTGCTG
TTCGGGCCCT GGGCCTGGGC GATCGAACTC GCCTCGTTCC TGCTGCTCGC CGGCCTGATC
GGCGTCCGCC ACATCGGCCG CGACCGCGCC CAGGAGCCAG ACGCATGA
 
Protein sequence
MALIAAALAV TRYNVVHALL YLLAMLLALA ASFFALRAAF AAVLLIMVYA GAIIVLFVFV 
VMAVGTSPEA IARERAMLRR SWPMPAAISV LVAAPFLFGI GEQAPGNTAP IAAQAVGRLL
FGPWAWAIEL ASFLLLAGLI GVRHIGRDRA QEPDA