| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4042 |
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| Symbol | |
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| ID | 3969291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4490112 |
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| End bp | 4490888 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637927146 |
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| Product | ABC transporter related |
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| Protein accession | YP_533887 |
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| Protein GI | 90425517 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.84015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGCCA TCCCCGAACA ATTCGCGATC CGCGTCCGCG ACCTTGTGGT CGGCTTCGGC
GATCAGATCG TGATCGATCA TTTGTCGCTG GATGTCCACC GCGGCGAAAT ACTCGGGCTG
GTCGGCGCCT CCGGCGGCGG CAAGTCGGTG CTGATGCGCA CCATCATCGG CCTCATTCCG
AAGCGCAGCG GCGAGATCGA GGTGATGGGC CGCGAGGCCG AAGGCGTGCT CGGCGGCCGG
CGCCGCAGCG CCTCGGCCTG GGGCATTCTG TTTCAGCAGG GCGCGCTGTT TTCGTCGCTG
ACCGCGCGGC AGAATGTACA GTTTCCGTTG CGCGAAAATC TCACGATTTC CGAACCGCTG
ATGGATGAAA TCGCCACCGC CAAGCTGGAG ATGGTGGGGC TCGCGCCGGA CGACTGGGAC
AAGTTTCCGG CGCAATTGTC CGGCGGCATG ACCAAGCGTG TGGCGTTGGC ACGGGCGCTG
GCGCTCGATC CCGGCATCGT CTTTCTCGAC GAGCCGACTT CGGGCCTCGA CCCGATCGCC
GCCGGCGACT TCGACGTGCT GATCCAAACC CTGCAGAAGA CCCTCAAGCT CACCGTGTTC
ATGGTGACGC ACGATCTCGC CAGCCTCAAC ACGGTGTGCG ACCGCGTCGC CGCGCTGGCC
GACGGCAAGA TCGTCGCCGT CGGTCCGATG GGTGAGCTGC TTGATTCCGA TCATCCGTGG
GTGAGGGCTT ATTTCCACGG CAAACGCTCG CGCATGCTGC GACCAACAAA GGACTAG
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| Protein sequence | MDAIPEQFAI RVRDLVVGFG DQIVIDHLSL DVHRGEILGL VGASGGGKSV LMRTIIGLIP
KRSGEIEVMG REAEGVLGGR RRSASAWGIL FQQGALFSSL TARQNVQFPL RENLTISEPL
MDEIATAKLE MVGLAPDDWD KFPAQLSGGM TKRVALARAL ALDPGIVFLD EPTSGLDPIA
AGDFDVLIQT LQKTLKLTVF MVTHDLASLN TVCDRVAALA DGKIVAVGPM GELLDSDHPW
VRAYFHGKRS RMLRPTKD
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