| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4030 |
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| Symbol | |
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| ID | 3969414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4478810 |
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| End bp | 4479358 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637927134 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_533875 |
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| Protein GI | 90425505 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.193201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTCTCA CTGATTCACT TCGCGACGAC ATTTTGGCGG CGGTCCCAAG TCTGCGGGCC
TTTGCGATCT CGCTCAGCGG CAACGGCGAT CGGGCCGACG ATCTGGTGCA AGAGACGCTG
TTGCGGGCCT TGGCCAATAT CGACTCGTTC CAGCCCGGCT CGAATCTGCC GGCATGGCTG
TTCACGATCC TGCGCAATCT CTTCCGCTCG GATTACCGCA AGCGGCGGCG CGAGGTCGAA
GACGCCGAAG GCAGCTATGC CAAGACCCTG AAGTCACAAC CCGGACAGAA TGCCCATCTG
GAGTTCGAGG AATTCCGCGC CGCCCTGGAA AAGCTACCGC AGGACCAGCG GGAAGCGCTG
ATCCTGGTCG GGGCCTCGGG ATTCTCCTAT GAGGACGCTG CGGCGATCTG CGGCTGTGCG
GTCGGCACCA TCAAGAGCCG CGTCAATCGC GCGCGCTCCA AGCTGAGTGC GATGCTCTAT
GTCGATGGCG CGGAGGATTT CGGCCCGGAC GATACGGTCC GCGCGGTAAT CGGCGGCAGC
GGCGGCTAA
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| Protein sequence | MPLTDSLRDD ILAAVPSLRA FAISLSGNGD RADDLVQETL LRALANIDSF QPGSNLPAWL
FTILRNLFRS DYRKRRREVE DAEGSYAKTL KSQPGQNAHL EFEEFRAALE KLPQDQREAL
ILVGASGFSY EDAAAICGCA VGTIKSRVNR ARSKLSAMLY VDGAEDFGPD DTVRAVIGGS
GG
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