| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4025 |
|---|
| Symbol | |
|---|
| ID | 3969409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4474545 |
|---|
| End bp | 4475306 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637927129 |
|---|
| Product | ErfK/YbiS/YcfS/YnhG |
|---|
| Protein accession | YP_533870 |
|---|
| Protein GI | 90425500 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.333261 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC TTTCTTCGTC CAATGGCGGT GGTCTGCTTC ATCGGCTGGC GATGACCACC
ATGGTGATCG CGGCCTCCTC GATCTTCGCT CATCAGGCCT CCGCGCAGGC GTTGAGCTAC
GCCGCGGTGC CGCAGGATGC CACCGCGCCG TTCGCGATCG ATGACAGCGC CGCTGACGAA
GGCGCGACGG TCCCCGAACA GTTCAAGCGC GCCGTGGTCA ACTACCCGAA CCGCGAGGCC
GCCGGCACGG TGATCGTCGA TACAGCGAAC ACCTATTTGT ATTACGTGCT GGGCCAGAAC
CGCGCCATCC GTTACGGCGT CGGCGTGGGC CGCGAAGGCT TCACCTGGGC GGGCGTGCAG
ACCATCACCC GCAAGAGCGA ATGGCCGGAT TGGCATCCGC CGGCGGAAAT GATTGCCCGC
CAGCCCTATC TGCCGCGTTT CATGGCTGGC GGGCCGGGTA ACCCGCTCGG CGCCCGAGCC
ATGTATCTCG GCTCCAGCGT CTACCGCATT CACGGCACCA ATGATCCCTC GACGATCGGC
AAGTTCGTCT CCTCAGGCTG CATCCGGCTC ACCAATGAGG ACGTCACCGA CCTGTTCGGC
CGGGTCGGAG TCGGCACCAA GGTCGTGGTG TTGCCGAAGG CGGAGCGCCG CTACGAAGCC
AGTTCGAAGT CCCCGCAGCG AGTGTCGAGC TCGGCGGTGC CGCCCGCGGC AGGCTCGATC
GGCCGCCAGG CGATGAACCT CTCGGCCTCC TTGGTGCACT GA
|
|---|
| Protein sequence | MIKLSSSNGG GLLHRLAMTT MVIAASSIFA HQASAQALSY AAVPQDATAP FAIDDSAADE
GATVPEQFKR AVVNYPNREA AGTVIVDTAN TYLYYVLGQN RAIRYGVGVG REGFTWAGVQ
TITRKSEWPD WHPPAEMIAR QPYLPRFMAG GPGNPLGARA MYLGSSVYRI HGTNDPSTIG
KFVSSGCIRL TNEDVTDLFG RVGVGTKVVV LPKAERRYEA SSKSPQRVSS SAVPPAAGSI
GRQAMNLSAS LVH
|
|---|
| |