Gene RPC_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4024 
Symbol 
ID3969408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4473849 
End bp4474529 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content64% 
IMG OID637927128 
Producthypothetical protein 
Protein accessionYP_533869 
Protein GI90425499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.70749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.220156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGT TCAGAACAGC AGCGATGGCC TCGTGCGCCG GCGGCTTAGC TGCGCTGGTA 
ATCGCCGGCT TGGTGGGCCC CGCTCATGCC GAGAACGACT TCCTCTCCGC GCTGTTCGGG
GCGTTCAATG CGCCGCAACG CAATTATCGT CCGGAGCCGA GCATGCCGAT GCCGTTTGCA
AGCGAGGGCG GCGTGGTCGA GCGGCAGCCG ACGCGCCGCG CCGCGCCGCG CAGCAGATCG
TCCGGCGGCG AGGGCGGTGG CCAGGCGTTT TGCGTCCGCA CTTGCGATGG TCGCTACTTC
CCGGTCAACG GCGCCGACAA TCGCAGCCGC GCCGAGACTT GCAACAGCTT CTGTCCAGCT
TCGGAGACCA AGGTGATGTA CGGCAGCACC ATCGACAATG CTTTGGCTGC AGGAAAATCC
TATTCGGAAT TGCCCAACGC GTTCAAATAT CGCAGCGAAA TCGTGACCGG CTGTACTTGC
AACGGCAAGG ATCAGTTCGG ACTGGCCAAA GTCGACATCG ACGACGATCC GACGCTGCGA
AAAGGCGACA TCGTGGCTGC CGCCGATGGT TTGATGGTGG CCGGGCGCGC CGATCGACGA
CACGGCGCCC TGAACTTCTC GCCGGCCTCC GGCAAAATCC GGGCGCGCTA TGAGAGGCTG
CCGGTGGTGG CGTCGGACTG A
 
Protein sequence
MAKFRTAAMA SCAGGLAALV IAGLVGPAHA ENDFLSALFG AFNAPQRNYR PEPSMPMPFA 
SEGGVVERQP TRRAAPRSRS SGGEGGGQAF CVRTCDGRYF PVNGADNRSR AETCNSFCPA
SETKVMYGST IDNALAAGKS YSELPNAFKY RSEIVTGCTC NGKDQFGLAK VDIDDDPTLR
KGDIVAAADG LMVAGRADRR HGALNFSPAS GKIRARYERL PVVASD