Gene RPC_4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4017 
Symbol 
ID3969207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4465134 
End bp4467053 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content67% 
IMG OID637927121 
ProductSulfate adenylyltransferase, large subunit 
Protein accessionYP_533862 
Protein GI90425492 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0529] Adenylylsulfate kinase and related kinases
[COG2895] GTPases - Sulfate adenylate transferase subunit 1 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00455] adenylylsulfate kinase (apsK)
[TIGR00485] translation elongation factor TU
[TIGR02034] sulfate adenylyltransferase, large subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.897015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.411266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCG TCGTCCCCGC CCCGCAGCCG TCGCTCGCCA CGCCGAACGG CACCACCCGC 
CCGCAAGTCC GCATCGTCAT CGTCGGCCAT GTCGACCACG GCAAATCCAC CCTGGTCGGA
CGGCTGCTGC ATGAGACCGG CTCGCTGCCC GACGGCAAAC TTGAAATGCT GAAGGAAGTC
AGCGCCCGGC GCGGCATGCC GTTCGAATGG TCGTTCCTGC TCGACGCGCT GCAGACCGAG
CGCGACCAGG GCATCACCAT CGACACCACG CAGATCTCGT TCCGCACCCA CTCCCGCGAC
GTGGTGCTGA TCGACGCCCC CGGCCACGCC GAATTCCTGC GCAACATGAT CACCGGTGCC
TCGCAGGCCG ACGGCGCGGT GCTGATCATC GACGCGCTGG AAGGCGTACG CGACCAGACC
AGGCGGCACG GCTATCTGTT GCATTTGCTC GGCATCAAAC AGGTCGCGAT CGTGGTCAAC
AAGATGGACC GCGTCGAATT CAGCGAAGCC CGCTTCACCG AGATCAGCGA TGAAATCTCC
GCGCATCTGA TCGAACTCGG CGTCACGCCG ACCGCGGTGA TCCCGATTTC CGCGCGCGAC
GGCGACGGCG TCGCCGAACG CACGCCCAAC ATCGTCTGGT ACAACGGCCC GACCGTGGTC
GAAGCGCTCG ACGCGCTGAC GCCGGCGCGG CCGCTCGACG AAATGCCGCT GCGGCTGCCG
GTGCAGGCAA TCTACAAATT CGACGACCGC CGCATCGTCG CCGGCCGCAT CGAATCCGGG
CATCTGCAGG CCGGCGACGA GATCGTGATC ATGCCGGCCG GCAAGATCGC TAAGATCAAG
ACCGTCGAAG GCTGGCCGGC GACGCCGCTG AGTGGCCCGC AAGGCGCCGG GCGTTCGGTC
GGCATCACGC TCGACCGTGA ATTGTTCATC GAGCGCGGCG ACGTCATCGC CCATACCGAG
TCCGCACCGC GCGACACCAG GCGGATTCAC GCCCGGATCT TCTGGCTGCA CCATCAGCCG
CTGAGCGTCG GCGCCAACAT CCTGGTCCGG CTCGGCACCC GGGAAACCCG CGCCAACGTC
GTCGCCATCG AGAAGGCGGT CGATCCCGGC GAACTCGCCG GCGTCCCGGC CAAATCGATC
GCGCACAATC ACGTCGGAGA AATCAACCTT TCGCTGCTGC ACCCCGTCGC GGCCGACCCC
TACCTCGACA ATCCGCGCAC CGGACGGCTG GTGATCGAGG TCAACGGCCG GATCGCCGGC
GGTGGGTTGG TGCTCGACGT CGATACCGGC CGTCGCGCCG CGGTCGATAT CGTGCCGGTG
GAATCCGCGC TGCGGCCGGA GGAACGCTCG GCGCGCTATC GCCACAACGG CGCGGTGCTG
TGGTTCACCG GTCTGCCCGG GGCGGGAAAA TCCACCTTGG CGGTGGCGCT GGAGCGCCGG
CTGTTCAACC GCGGCGGCTC GCCGATCCTG CTCGACGGCG ACACCTTGCG CGCTGGGCTG
AACGGCGATC TTGGATTCTC CGCCAAGGAC CGCTCGGAGA ACATCCGCCG GCTGGCGGAA
GTCGCCACCC ACCTCGCGCG CAACGGCCAC ATCGCCATCG TCGCGGCGGT GTCGCCGTCG
ATCGAGGACC GCGCCGCGGC GCGACGGATC GCAGATGCCT TGTTCCGCGA GATCTATGTC
GCGACGCCGG CCGAAATCTG CGAGAGCCGC GATCCCAAGG GGCACTACGC CAAGGCCCGC
GCCGGCACGC TGAAAGGCTT CACCGGGATC GGCAATGACT ATCAGCCGCC CGCCGAAAGC
GAATTGACGA TCGACACCGC CACCCGCCCG GTCGCCGAGG CGATCGACGA GATCGAACTG
ATGCTGGCGA AATCCGGCGT GCTGATCGAA GAACTCGTCG ACCTCGCCGC CAACATCTAA
 
Protein sequence
MNLVVPAPQP SLATPNGTTR PQVRIVIVGH VDHGKSTLVG RLLHETGSLP DGKLEMLKEV 
SARRGMPFEW SFLLDALQTE RDQGITIDTT QISFRTHSRD VVLIDAPGHA EFLRNMITGA
SQADGAVLII DALEGVRDQT RRHGYLLHLL GIKQVAIVVN KMDRVEFSEA RFTEISDEIS
AHLIELGVTP TAVIPISARD GDGVAERTPN IVWYNGPTVV EALDALTPAR PLDEMPLRLP
VQAIYKFDDR RIVAGRIESG HLQAGDEIVI MPAGKIAKIK TVEGWPATPL SGPQGAGRSV
GITLDRELFI ERGDVIAHTE SAPRDTRRIH ARIFWLHHQP LSVGANILVR LGTRETRANV
VAIEKAVDPG ELAGVPAKSI AHNHVGEINL SLLHPVAADP YLDNPRTGRL VIEVNGRIAG
GGLVLDVDTG RRAAVDIVPV ESALRPEERS ARYRHNGAVL WFTGLPGAGK STLAVALERR
LFNRGGSPIL LDGDTLRAGL NGDLGFSAKD RSENIRRLAE VATHLARNGH IAIVAAVSPS
IEDRAAARRI ADALFREIYV ATPAEICESR DPKGHYAKAR AGTLKGFTGI GNDYQPPAES
ELTIDTATRP VAEAIDEIEL MLAKSGVLIE ELVDLAANI